RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 RFKQ969G6 155 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 WDR12Q9GZL7 423 aaKnown RBP18.64■□□□□ 0.57
PTPRE-201ENST00000254667 VRTNQ9H8Y1 702 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 INSL5Q9Y5Q6 135 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 MTMR11A4FU01 709 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 RPS6KA3P51812 740 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 SIM2Q14190 667 aaPredicted RBP18.63■□□□□ 0.57
PTPRE-201ENST00000254667 PIGWQ7Z7B1 504 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 GALNT5Q7Z7M9 940 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 KIFC1Q9BW19 673 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 KCNN2Q9H2S1 579 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 TLR9Q9NR96 1032 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 CKLFQ9UBR5 152 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 TULP2O00295 520 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 CFHP08603 1231 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 GDI1P31150 447 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 MASP1P48740 699 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 ARHGAP22Q7Z5H3 698 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 NSMCE3Q96MG7 304 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 RETREG1Q9H6L5 497 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 SIX4Q9UIU6 781 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 PTPN5P54829 565 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 RAPSNQ13702 412 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 HKDC1Q2TB90 917 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 POC5Q8NA72 575 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 COX4I2Q96KJ9 171 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 CNPPD1Q9BV87 410 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 TAPBPLQ9BX59 468 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 SNX7Q9UNH6 387 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 TLL2Q9Y6L7 1015 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 PCDH7O60245 1069 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 AOC2O75106 756 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 ACTR1BP42025 376 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 KCNQ1P51787 676 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 ACTR1AP61163 376 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 NFKB2Q00653 900 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 TRIM32Q13049 653 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 FAM91A1Q658Y4 838 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 LYSMD3Q7Z3D4 306 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 LRRTM4Q86VH4 590 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 CPNE8Q86YQ8 564 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 MCEMP1Q8IX19 187 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 BPIFB1Q8TDL5 484 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 SMURF2Q9HAU4 748 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 MRM3Q9HC36 420 aaKnown RBP18.63■□□□□ 0.57
PTPRE-201ENST00000254667 COMMD9Q9P000 198 aa18.63■□□□□ 0.57
PTPRE-201ENST00000254667 DUXAA6NLW8 204 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 UPK3BL1B0FP48 263 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 UPK3BL2E5RIL1 263 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 CASKO14936 926 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 LPIN1Q14693 890 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 TCEAL1Q15170 157 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 ZNF311Q5JNZ3 666 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 DDI2Q5TDH0 399 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 TMEM209Q96SK2 561 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 HBEGFQ99075 208 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 SLC29A3Q9BZD2 475 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 SLC32A1Q9H598 525 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 ANKRD66B4E2M5 251 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 NIPSNAP2O75323 286 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 TGFBR2P37173 567 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 ARFIP1P53367 373 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 TPRG1Q6ZUI0 275 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 AUTS2Q8WXX7 1259 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 KLHL31Q9H511 634 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 ABCB10Q9NRK6 738 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 J3KR12 359 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 HAS3O00219 553 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 PRKAR1AP10644 381 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 ACVRL1P37023 503 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 UBXN2BQ14CS0 331 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 SLC5A9Q2M3M2 681 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 MS4A13Q5J8X5 152 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 TXNRD3NBQ6F5E7 133 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 KLHL24Q6TFL4 600 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 ANKRD46Q86W74 232 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 C1GALT1C1Q96EU7 318 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 PTPN18Q99952 460 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 S100GP29377 79 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 PIK3CBP42338 1070 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 PLA2G16P53816 162 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 ZMIZ2Q8NF64 920 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 PSMA8Q8TAA3 256 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 SIPA1Q96FS4 1042 aa18.62■□□□□ 0.57
PTPRE-201ENST00000254667 GPATCH1Q9BRR8 931 aaKnown RBP18.62■□□□□ 0.57
PTPRE-201ENST00000254667 ATP1B2P14415 290 aaPredicted RBP18.61■□□□□ 0.57
PTPRE-201ENST00000254667 IRF9Q00978 393 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 SAPCD2Q86UD0 394 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 CARS2Q9HA77 564 aaKnown RBP18.61■□□□□ 0.57
PTPRE-201ENST00000254667 ABI3Q9P2A4 366 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 UGT1A9O60656 530 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 ECI2O75521 394 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 KHDRBS3O75525 346 aaKnown RBP18.61■□□□□ 0.57
PTPRE-201ENST00000254667 ANGPTL1O95841 491 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 FADS2O95864 444 aaKnown RBP18.61■□□□□ 0.57
PTPRE-201ENST00000254667 UGT1A6P19224 532 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 UGT1A1P22309 533 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 UGT1A4P22310 534 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 UGT1A3P35503 534 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms