RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SAT1P21673 171 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 SDHBP21912 280 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 TYK2P29597 1187 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 GPR3P46089 330 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 PGGT1BP53609 377 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 EPHA4P54764 986 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 MAZP56270 477 aaKnown RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 HHEXQ03014 270 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 IFFO1Q0D2I5 559 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 PIWIL4Q7Z3Z4 852 aaKnown RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 LCA5Q86VQ0 697 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 DCUN1D3Q8IWE4 304 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 MYO1HQ8N1T3 1032 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 SETD7Q8WTS6 366 aaKnown RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 ANKRD49Q8WVL7 239 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 CXorf40BQ96DE9 158 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 CABS1Q96KC9 395 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 CNDP2Q96KP4 475 aaKnown RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 FOPNLQ96NB1 174 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 ZIM3Q96PE6 472 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 TRIT1Q9H3H1 467 aaKnown RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 IMP3Q9NV31 184 aaKnown RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 SIRPGQ9P1W8 387 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 CTNNAL1Q9UBT7 734 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 POLG2Q9UHN1 485 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 NOVA2Q9UNW9 492 aaKnown RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 ASF1AQ9Y294 204 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 UQCRHLA0A096LP55 91 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 A0A096LPK6 155 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 FAM221BA6H8Z2 402 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 DKK1O94907 266 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 C1orf105O95561 183 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 C8GP07360 202 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 UQCRHP07919 91 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 ENO2P09104 434 aaPredicted RBP13.74□□□□□ -0.21
VPS25-201ENST00000253794 COL6A2P12110 1019 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 ATP6V0D1P61421 351 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 ILKQ13418 452 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 SQSTM1Q13501 440 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 GRB7Q14451 532 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 CASP8Q14790 479 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 TMEM26Q6ZUK4 368 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 SH2D5Q6ZV89 423 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 CLEC14AQ86T13 490 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 TRIM48Q8IWZ4 208 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 CENPLQ8N0S6 344 aaPredicted RBP13.74□□□□□ -0.21
VPS25-201ENST00000253794 PKNOX2Q96KN3 472 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 CAMK1GQ96NX5 476 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 SLC12A9Q9BXP2 914 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 EPB41L1Q9H4G0 881 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 TFB2MQ9H5Q4 396 aaKnown RBP13.74□□□□□ -0.21
VPS25-201ENST00000253794 VIPAS39Q9H9C1 493 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 LRIT1Q9P2V4 623 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 ACOT9Q9Y305 439 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 CFAP20Q9Y6A4 193 aaKnown RBP13.74□□□□□ -0.21
VPS25-201ENST00000253794 RNF215Q9Y6U7 377 aa13.74□□□□□ -0.21
VPS25-201ENST00000253794 CFAP54Q96N23 3096 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 MYO1CO00159 1063 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 CATP04040 527 aaKnown RBP13.73□□□□□ -0.21
VPS25-201ENST00000253794 CCDC166P0CW27 439 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 CD1DP15813 335 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 SLCO1A2P46721 670 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 ACADVLP49748 655 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 ABRQ12979 859 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 GPR18Q14330 331 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 PPP1R3AQ16821 1122 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 TAF1BQ53T94 588 aaPredicted RBP13.73□□□□□ -0.21
VPS25-201ENST00000253794 TNFAIP8L3Q5GJ75 292 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 DUS1LQ6P1R4 473 aaKnown RBP13.73□□□□□ -0.21
VPS25-201ENST00000253794 GUSBP11Q6P575 273 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 RAPH1Q70E73 1250 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 ADAMTSL2Q86TH1 951 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 TBC1D1Q86TI0 1168 aaPredicted RBP13.73□□□□□ -0.21
VPS25-201ENST00000253794 SPNS2Q8IVW8 549 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 CYP4X1Q8N118 509 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 OR5AR1Q8NGP9 310 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 MAGEC3Q8TD91 643 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 DLG3Q92796 817 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 RAD51AP1Q96B01 352 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 MENTQ9BUN1 341 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 SLC32A1Q9H598 525 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 IGSF5Q9NSI5 407 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 TLK1Q9UKI8 766 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 PCDHGA1Q9Y5H4 931 aa13.73□□□□□ -0.21
VPS25-201ENST00000253794 TRBV23OR9-2A0A075B6M9 112 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 PRAMEF33A0A0G2JMD5 474 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 ARHGEF33A8MVX0 844 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 ZBTB14O43829 449 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 KDM1AO60341 852 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 KLHL2O95198 593 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 LTA4HP09960 611 aaKnown RBP13.72□□□□□ -0.21
VPS25-201ENST00000253794 TPBGLP0DKB5 382 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 ERGP11308 486 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 CEACAM1P13688 526 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 GPLD1P80108 840 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 DAB2P98082 770 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 DLG1Q12959 904 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 CLPPQ16740 277 aaPredicted RBP13.72□□□□□ -0.21
VPS25-201ENST00000253794 FAM83EQ2M2I3 478 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms