RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 GFM2Q969S9 779 aaKnown RBP25.03■■□□□ 1.6
RAB40C-201ENST00000248139 OARD1Q9Y530 152 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 PIGAP37287 484 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 RGS4P49798 205 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 PHC1P78364 1004 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 BCL2L1Q07817 233 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 CYP4F3Q08477 520 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 CRY1Q16526 586 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 INO80DQ53TQ3 878 aaPredicted RBP25.03■■□□□ 1.6
RAB40C-201ENST00000248139 DNAJB7Q7Z6W7 309 aaPredicted RBP25.03■■□□□ 1.6
RAB40C-201ENST00000248139 RNF175Q8N4F7 328 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 ZBTB2Q8N680 514 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 PYCR2Q96C36 320 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 ULK4Q96C45 1275 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 FANCEQ9HB96 536 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 GNPTGQ9UJJ9 305 aa25.03■■□□□ 1.6
RAB40C-201ENST00000248139 FAF1Q9UNN5 650 aaPredicted RBP25.03■■□□□ 1.6
RAB40C-201ENST00000248139 GLUD1P00367 558 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 CST1P01037 141 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 PGRP06401 933 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 NR4A1P22736 598 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 SULT1C3Q6IMI6 304 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 ELMSAN1Q6PJG2 1045 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 CRIPAKQ8N1N5 446 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 SLC43A3Q8NBI5 491 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 ZNF461Q8TAF7 563 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 RAET1EQ8TD07 263 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 SLC22A17Q8WUG5 538 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 NCLNQ969V3 563 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 PPP3R2Q96LZ3 170 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 ZNF334Q9HCZ1 680 aaPredicted RBP25.02■■□□□ 1.6
RAB40C-201ENST00000248139 HPS4Q9NQG7 708 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 EIF3LQ9Y262 564 aaKnown RBP25.02■■□□□ 1.6
RAB40C-201ENST00000248139 LRATO95237 230 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 NPPAP01160 153 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 THRBP10828 461 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 ALDH3A2P51648 485 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 NAA20P61599 178 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 CCNYL2Q5T2Q4 361 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 DET1Q7L5Y6 550 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 SNX20Q7Z614 316 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 TMEM179BQ7Z7N9 219 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 ZNF548Q8NEK5 533 aaPredicted RBP25.02■■□□□ 1.6
RAB40C-201ENST00000248139 SKA2Q8WVK7 121 aaPredicted RBP25.02■■□□□ 1.6
RAB40C-201ENST00000248139 ITCHQ96J02 903 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 OR52E6Q96RD3 313 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 HIPK3Q9H422 1215 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 SRRDQ9UH36 339 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 DLGAP4Q9Y2H0 992 aa25.02■■□□□ 1.6
RAB40C-201ENST00000248139 GLYATL1P3A0A0U1RQE8 302 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 G3V2T6 193 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 RGS14O43566 566 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 GMNNO75496 209 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 TRBC1P01850 177 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 ACRV1P26436 265 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 LAPTM4AQ15012 233 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 GPRC6AQ5T6X5 926 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 CERS6Q6ZMG9 384 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 GPR26Q8NDV2 337 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 FAM162AQ96A26 154 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 ZBTB18Q99592 522 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 LRTM1Q9HBL6 345 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 CPQQ9Y646 472 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 GNGT2O14610 69 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 PRRG1O14668 218 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 PQBP1O60828 265 aaKnown RBP25.01■■□□□ 1.59
RAB40C-201ENST00000248139 ITGALP20701 1170 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 DGKAP23743 735 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 GNPDA1P46926 289 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 STK19P49842 368 aaPredicted RBP25.01■■□□□ 1.59
RAB40C-201ENST00000248139 BNIP3Q12983 259 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 ZXDCQ2QGD7 858 aaPredicted RBP25.01■■□□□ 1.59
RAB40C-201ENST00000248139 SPESP1Q6UW49 350 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 ZDHHC13Q8IUH4 622 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 BPIFB6Q8NFQ5 453 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 INVSQ9Y283 1065 aa25.01■■□□□ 1.59
RAB40C-201ENST00000248139 C7P10643 843 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 AKT1P31749 480 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 MEP1AQ16819 746 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 SPOUT1Q5T280 376 aaKnown RBP25■■□□□ 1.59
RAB40C-201ENST00000248139 RNF217Q8TC41 542 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 SNRNP27Q8WVK2 155 aaKnown RBP25■■□□□ 1.59
RAB40C-201ENST00000248139 TSSK3Q96PN8 268 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 INPP5KQ9BT40 448 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 PCDHGA8Q9Y5G5 932 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 ANAPC1Q9H1A4 1944 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 NPIPB15A6NHN6 443 aaPredicted RBP25■■□□□ 1.59
RAB40C-201ENST00000248139 MYCLP1P12525 358 aaPredicted RBP25■■□□□ 1.59
RAB40C-201ENST00000248139 TACR1P25103 407 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 CTSOP43234 321 aaPredicted RBP25■■□□□ 1.59
RAB40C-201ENST00000248139 FRS2Q8WU20 508 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 THAP11Q96EK4 314 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 SLC47A1Q96FL8 570 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 OSBPL6Q9BZF3 934 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 AMBRA1Q9C0C7 1298 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 FAM8A1Q9UBU6 413 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 PCDHB14Q9Y5E9 798 aa25■■□□□ 1.59
RAB40C-201ENST00000248139 K7EPI3 171 aa24.99■■□□□ 1.59
RAB40C-201ENST00000248139 MANBAO00462 879 aa24.99■■□□□ 1.59
RAB40C-201ENST00000248139 ZNF182P17025 639 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms