RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 HELZP42694 1942 aaKnown RBP21.47■■□□□ 1.03
RNF39-201ENST00000244360 FAM149AA5PLN7 773 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 EIF3FO00303 357 aaPredicted RBP21.47■■□□□ 1.03
RNF39-201ENST00000244360 INPP4BO15327 924 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 PTSQ03393 145 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 RFTN2Q52LD8 501 aaPredicted RBP21.47■■□□□ 1.03
RNF39-201ENST00000244360 CDKL4Q5MAI5 379 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 SLC2A7Q6PXP3 512 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 DLEU7Q6UYE1 221 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 GALNT13Q8IUC8 556 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 CROCCP3Q8IVE0 287 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 ELMOD1Q8N336 334 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 KREMEN2Q8NCW0 462 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 SMPD3Q9NY59 655 aaPredicted RBP21.47■■□□□ 1.03
RNF39-201ENST00000244360 POLR3HQ9Y535 204 aaPredicted RBP21.47■■□□□ 1.03
RNF39-201ENST00000244360 ACOX3O15254 700 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 CA8P35219 290 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 CAPGP40121 348 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 CDH15P55291 814 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 B4GALNT1Q00973 533 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 KIAA0040Q15053 153 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 PATL1Q86TB9 770 aaKnown RBP21.47■■□□□ 1.03
RNF39-201ENST00000244360 HOMEZQ8IX15 550 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 LEMD2Q8NC56 503 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 ZNF641Q96N77 438 aaPredicted RBP21.47■■□□□ 1.03
RNF39-201ENST00000244360 TMEM74Q96NL1 305 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 ASAH2Q9NR71 780 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 ZMYM5Q9UJ78 669 aa21.47■■□□□ 1.03
RNF39-201ENST00000244360 PLXNB3Q9ULL4 1909 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 GRM6O15303 877 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 TPST1O60507 370 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 TIMP1P01033 207 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 EBLN1P0CF75 366 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 GDF5P43026 501 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 ZDHHC20Q5W0Z9 365 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 ASTLQ6HA08 431 aaPredicted RBP21.46■■□□□ 1.03
RNF39-201ENST00000244360 TRIM46Q7Z4K8 759 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 DHRSXQ8N5I4 330 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 ZNF420Q8TAQ5 688 aaPredicted RBP21.46■■□□□ 1.03
RNF39-201ENST00000244360 ASIC4Q96FT7 647 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 COPS8Q99627 209 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 CORO1BQ9BR76 489 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 ANGPTL3Q9Y5C1 460 aa21.46■■□□□ 1.03
RNF39-201ENST00000244360 SLC28A1O00337 649 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 CLOCKO15516 846 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 RGS14O43566 566 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 ADH1AP07327 375 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 GNAO1P09471 354 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 VARSP26640 1264 aaKnown RBP21.45■■□□□ 1.03
RNF39-201ENST00000244360 CCR2P41597 374 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 SEMG2Q02383 582 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 GBX1Q14549 363 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 ATP13A5Q4VNC0 1218 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 CARD16Q5EG05 197 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 TTC23LQ6PF05 361 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 ULK4Q96C45 1275 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 ISOC1Q96CN7 298 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 GALNT8Q9NY28 637 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 ASIC5Q9NY37 505 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 CCL26Q9Y258 94 aa21.45■■□□□ 1.03
RNF39-201ENST00000244360 POP4O95707 220 aaKnown RBP21.45■■□□□ 1.02
RNF39-201ENST00000244360 LDLRP01130 860 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 MTHFD1P11586 935 aaKnown RBP21.45■■□□□ 1.02
RNF39-201ENST00000244360 CASP2P42575 452 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 RANBP1P43487 201 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 RPS9P46781 194 aaKnown RBP21.45■■□□□ 1.02
RNF39-201ENST00000244360 EMP3P54852 163 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 GPR180Q86V85 440 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 CLVS1Q8IUQ0 354 aaPredicted RBP21.45■■□□□ 1.02
RNF39-201ENST00000244360 CYGBQ8WWM9 190 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 PREBQ9HCU5 417 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 ZNF639Q9UID6 485 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 SLC25A13Q9UJS0 675 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 NEUROG3Q9Y4Z2 214 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 FADS3Q9Y5Q0 445 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 PIKFYVEQ9Y2I7 2098 aa21.45■■□□□ 1.02
RNF39-201ENST00000244360 EI24O14681 340 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 RSL1D1O76021 490 aaKnown RBP21.44■■□□□ 1.02
RNF39-201ENST00000244360 CXCL14O95715 111 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 C1SP09871 688 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 PIK3CGP48736 1102 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 MAD2L1Q13257 205 aaPredicted RBP21.44■■□□□ 1.02
RNF39-201ENST00000244360 DPY19L3Q6ZPD9 716 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 IFNEQ86WN2 208 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 TMEM25Q86YD3 366 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 USP7Q93009 1102 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 SLC29A3Q9BZD2 475 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 MAGEL2Q9UJ55 1249 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 PTPRSQ13332 1948 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 A0A0J9YVX5 310 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 A0A1W2PQ67 120 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 EPB42P16452 691 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 HRH2P25021 359 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 CCR7P32248 378 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 GGT5P36269 586 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 RFLNAQ6ZTI6 216 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 PNPT1Q8TCS8 783 aaKnown RBP21.44■■□□□ 1.02
RNF39-201ENST00000244360 SLC22A17Q8WUG5 538 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 BDH2Q9BUT1 245 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 ZDHHC6Q9H6R6 413 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms