RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 IRAK1BP1Q5VVH5 260 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CST9Q5W186 159 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 FAM45BPQ6NSW5 357 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 HACD2Q6Y1H2 254 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ST13P4Q8IZP2 240 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CCNYL1Q8N7R7 359 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 GPR150Q8NGU9 434 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 FAM45AQ8TCE6 357 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 RCN3Q96D15 328 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 L3HYPDHQ96EM0 354 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ZNF599Q96NL3 588 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 TOX2Q96NM4 488 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 TSC22D3Q99576 134 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 LBHD1Q9BQE6 289 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SHCBP1LQ9BZQ2 653 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 Q9H521 79 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 WDR41Q9HAD4 459 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 MSL2Q9HCI7 577 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 RGS18Q9NS28 235 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SARDHQ9UL12 918 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 COPG1Q9Y678 874 aaKnown RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 UTRNP46939 3433 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 NYNRINQ9P2P1 1898 aaKnown RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CCDC189A1A4V9 331 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CCDC78A2IDD5 438 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 OR6C75A6NL08 312 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 A8MT66 165 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 TRIM38O00635 465 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 DENRO43583 198 aaKnown RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SKAP2O75563 359 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ZMPSTE24O75844 475 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 RTN3O95197 1032 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 LY86O95711 162 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 MOCS2O96007 188 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 IGLV3-27P01718 113 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 FGF1P05230 155 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ITGB1P05556 798 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ASGR1P07306 291 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 MMP2P08253 660 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 F7P08709 466 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 VCLP18206 1134 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 IMPDH1P20839 514 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 PEX2P28328 305 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 PBX3P40426 434 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 HSPA13P48723 471 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ACADVLP49748 655 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SUOXP51687 545 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 THOP1P52888 689 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SH3BGRP55822 239 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 NAA20P61599 178 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 FAM189BP81408 668 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 DLX2Q07687 328 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SMARCB1Q12824 385 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 FLOT2Q14254 428 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CSHL1Q14406 222 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 PCOLCEQ15113 449 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 PDCD2Q16342 344 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SLC39A12Q504Y0 691 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SFT2D3Q587I9 215 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 RARS2Q5T160 578 aaKnown RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 HECTD2Q5U5R9 776 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CCSAPQ6IQ19 270 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CNSTQ6PJW8 725 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 TAS1R1Q7RTX1 841 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SCN4BQ8IWT1 228 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 PCSK9Q8NBP7 692 aaKnown RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ICA1LQ8NDH6 482 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 OR13J1Q8NGT2 312 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 AGR3Q8TD06 166 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ZFAND2BQ8WV99 257 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 HMCESQ96FZ2 354 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 FEM1CQ96JP0 617 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CATSPER2Q96P56 530 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 GBP5Q96PP8 586 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CDRT15Q96T59 188 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 MRPL1Q9BYD6 325 aaKnown RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 YIPF3Q9GZM5 350 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 EBF3Q9H4W6 596 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 NT5MQ9NPB1 228 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 MPP6Q9NZW5 540 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 NDUFA13Q9P0J0 144 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 EPS15L1Q9UBC2 864 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 MAGEL2Q9UJ55 1249 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 TBC1D30Q9Y2I9 924 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 DTNAQ9Y4J8 743 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 CFAP20Q9Y6A4 193 aaKnown RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 PRSS51A0A1B0GVH4 220 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 A0A1W2PR48 441 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 H0YJX3 145 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 ACOT8O14734 319 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 RAMP2O60895 175 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 SMIM24O75264 130 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 CCDC166P0CW27 439 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 OGNP20774 298 aaKnown RBP7.78□□□□□ -1.16
CXCR4-201ENST00000241393 YY1P25490 414 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 CD86P42081 329 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 CCR10P46092 362 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 ALDH1A3P47895 512 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 PGFP49763 221 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 PRAMEP78395 509 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms