RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 GTF2H3Q13889 308 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 ZRSR2Q15696 482 aaKnown RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 PPP1R3AQ16821 1122 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 UNC50Q53HI1 259 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 KIAA1324Q6UXG2 1013 aaKnown RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 CLDN19Q8N6F1 224 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 ZNF366Q8N895 744 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 FBXO15Q8NCQ5 510 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 CEP70Q8NHQ1 597 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 ZNF483Q8TF39 744 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 ATL1Q8WXF7 558 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 CMTM5Q96DZ9 223 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 PHF21BQ96EK2 531 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 SGF29Q96ES7 293 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 HSPA12BQ96MM6 686 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 SLC12A9Q9BXP2 914 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 MMADHCQ9H3L0 296 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 TRIM39Q9HCM9 518 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 PREBQ9HCU5 417 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 SARS2Q9NP81 518 aaKnown RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 PNPOQ9NVS9 261 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 CD274Q9NZQ7 290 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 MARCOQ9UEW3 520 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 CAPN14A8MX76 684 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 A8MX80 341 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 CDC7O00311 574 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 HGSO14964 777 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-201ENST00000238688 DIAPH2O60879 1101 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 KCNJ13O60928 360 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 KATNA1O75449 491 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 GPC4O75487 556 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 TM7SF2O76062 418 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 ESRRBO95718 433 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 ENO1P06733 434 aaKnown RBP12.92□□□□□ -0.34
SLIRP-201ENST00000238688 CHRNGP07510 517 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 ANXA5P08758 320 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 HIST1H2AGP0C0S8 130 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-201ENST00000238688 KITP10721 976 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 GM2AP17900 193 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 HIST1H2ADP20671 130 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 CYP2A7P20853 494 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 MAOBP27338 520 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 CD6P30203 668 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 GGT5P36269 586 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 GPR1P46091 355 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 KCNC1P48547 511 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 TPMTP51580 245 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 CLCQ05315 142 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 CNTN1Q12860 1018 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 RPA4Q13156 261 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 TUBB3Q13509 450 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 DUOXA1Q1HG43 343 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 AGBL4Q5VU57 503 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 ASRGL1Q7L266 308 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 RASGRP3Q8IV61 690 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 ARHGAP24Q8N264 748 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 CPSF7Q8N684 471 aaKnown RBP12.92□□□□□ -0.34
SLIRP-201ENST00000238688 PHC3Q8NDX5 983 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 SCAMP4Q969E2 229 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 TMEM159Q96B96 161 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 KLHL29Q96CT2 875 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 TOE1Q96GM8 510 aaKnown RBP12.92□□□□□ -0.34
SLIRP-201ENST00000238688 NSL1Q96IY1 281 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 HIST1H2AHQ96KK5 128 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 SLC30A3Q99726 388 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 HIST1H2AJQ99878 128 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 CCM2Q9BSQ5 444 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 H2AFJQ9BTM1 129 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 NMUR2Q9GZQ4 415 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 C1orf21Q9H246 121 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 MTG2Q9H4K7 406 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 PARVBQ9HBI1 364 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 ZDHHC2Q9UIJ5 367 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 PTBP2Q9UKA9 531 aaKnown RBP12.92□□□□□ -0.34
SLIRP-201ENST00000238688 PCTPQ9UKL6 214 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 TMPRSS11EQ9UL52 423 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 SLC6A14Q9UN76 642 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 WASF3Q9UPY6 502 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 TRAF6Q9Y4K3 522 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 PRSS21Q9Y6M0 314 aa12.92□□□□□ -0.34
SLIRP-201ENST00000238688 A0A0U1RQS6 177 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 NEMP2A6NFY4 417 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 FADS2P1A8MWK0 482 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 GFYI3L273 518 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 AZIN1O14977 448 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 GPR39O43194 453 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 GRID2O43424 1007 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 OTCP00480 354 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 DNTTP04053 509 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 UROSP10746 265 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 CSRP1P21291 193 aaKnown RBP12.91□□□□□ -0.34
SLIRP-201ENST00000238688 MPSTP25325 297 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 PTPN4P29074 926 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 EEF1DP29692 281 aaKnown RBP12.91□□□□□ -0.34
SLIRP-201ENST00000238688 DRD3P35462 400 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 DPP6P42658 865 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 ATP4BP51164 291 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 NOVA1P51513 510 aaKnown RBP12.91□□□□□ -0.34
SLIRP-201ENST00000238688 NCALDP61601 193 aa12.91□□□□□ -0.34
SLIRP-201ENST00000238688 RPS21P63220 83 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms