RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CPQQ9Y646 472 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 MLYCDO95822 493 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 TBX18O95935 607 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 NTRK1P04629 796 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 ATXN1LP0C7T5 689 aaKnown RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 SHMT2P34897 504 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 PLA2G16P53816 162 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 ARHGAP15Q53QZ3 475 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 ZC3H12BQ5HYM0 836 aaKnown RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 EGFLAMQ63HQ2 1017 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 SLC16A12Q6ZSM3 486 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 OR8J3Q8NGG0 315 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 FCRL2Q96LA5 508 aaPredicted RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 NOL6Q9H6R4 1146 aaKnown RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 MARCH4Q9P2E8 410 aaPredicted RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 FAM50BQ9Y247 325 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 SYCE1LA8MT33 242 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 SYNCRIPO60506 623 aaKnown RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 TLR5O60602 858 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 UGT2B11O75310 529 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 ARSDP51689 593 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 DIO3P55073 304 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 FAM98BQ52LJ0 330 aaKnown RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 PYCR3Q53H96 274 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 C6orf141Q5SZD1 244 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 ARL14EPQ8N8R7 260 aaPredicted RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 DNAJB14Q8TBM8 379 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 OSBPL10Q9BXB5 764 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 ING2Q9H160 280 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 FBXO8Q9NRD0 319 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.18■□□□□ 0.82
SNX3-201ENST00000230085 KIAA1522Q9P206 1035 aaPredicted RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 AP3M1Q9Y2T2 418 aa20.18■□□□□ 0.82
SNX3-201ENST00000230085 TCF20Q9UGU0 1960 aaKnown RBP20.18■□□□□ 0.82
SNX3-201ENST00000230085 COCHO43405 550 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 CHEK2O96017 543 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 CCDC159P0C7I6 412 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 LAMP2P13473 410 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 IL1RNP18510 177 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 TSPAN8P19075 237 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 GGT1P19440 569 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 ACVR2AP27037 513 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 MLLT6P55198 1093 aaPredicted RBP20.17■□□□□ 0.82
SNX3-201ENST00000230085 PPP2R2BQ00005 443 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 ACOX1Q15067 660 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 HECTD3Q5T447 861 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 DLEU7Q6UYE1 221 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 PIM3Q86V86 326 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 ZNF513Q8N8E2 541 aaPredicted RBP20.17■□□□□ 0.82
SNX3-201ENST00000230085 CHDHQ8NE62 594 aaPredicted RBP20.17■□□□□ 0.82
SNX3-201ENST00000230085 OR52K2Q8NGK3 314 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 EFHD2Q96C19 240 aaPredicted RBP20.17■□□□□ 0.82
SNX3-201ENST00000230085 CCDC138Q96M89 665 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 ALPK1Q96QP1 1244 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 SMG9Q9H0W8 520 aaKnown RBP20.17■□□□□ 0.82
SNX3-201ENST00000230085 SMPD4Q9NXE4 827 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 GDE1Q9NZC3 331 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 DNAJB9Q9UBS3 223 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 SUN2Q9UH99 717 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 ST14Q9Y5Y6 855 aa20.17■□□□□ 0.82
SNX3-201ENST00000230085 C2CD4DB7Z1M9 353 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 E9PAM4 449 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 M0QX08 132 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 PPP6CO00743 305 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 SIX3O95343 332 aaPredicted RBP20.16■□□□□ 0.82
SNX3-201ENST00000230085 ANXA6P08133 673 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 HLA-DPA1P20036 260 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 ELK4P28324 431 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 ETFBP38117 255 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 MLLT10P55197 1068 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 PRKG2Q13237 762 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 PLCL1Q15111 1095 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 PFKFB4Q16877 469 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 GLYATQ6IB77 296 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 ZNF683Q8IZ20 524 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 CMTM8Q8IZV2 173 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 TMBIM1Q969X1 311 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 UGT2B28Q9BY64 529 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 NDFIP2Q9NV92 336 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 FAM118AQ9NWS6 357 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 FAM32AQ9Y421 112 aaKnown RBP20.16■□□□□ 0.82
SNX3-201ENST00000230085 PTGDR2Q9Y5Y4 395 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 MUC3AQ02505 3323 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 HTR3EA5X5Y0 456 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 CD3EAPO15446 510 aaKnown RBP20.16■□□□□ 0.82
SNX3-201ENST00000230085 MRPS14O60783 128 aaKnown RBP20.16■□□□□ 0.82
SNX3-201ENST00000230085 BCAS1O75363 584 aaPredicted RBP20.16■□□□□ 0.82
SNX3-201ENST00000230085 RPP40O75818 363 aaKnown RBP20.16■□□□□ 0.82
SNX3-201ENST00000230085 GABARAPO95166 117 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 FGF1P05230 155 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 HTR1AP08908 422 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 LINC00032P0C843 101 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 RHOQP17081 205 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 DDX6P26196 483 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNX3-201ENST00000230085 RYKP34925 604 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 OCA2Q04671 838 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 TRIM16LQ309B1 348 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 SIRPB2Q5JXA9 342 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 AGAP7PQ5VUJ5 663 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 RNF165Q6ZSG1 346 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms