RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PRMT2P55345 433 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 NCS1P62166 190 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 MGAT3Q09327 533 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 CST9Q5W186 159 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 SIGIRRQ6IA17 410 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 NADSYN1Q6IA69 706 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 DESI1Q6ICB0 168 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 Q6ZSR9 355 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 GALNT12Q8IXK2 581 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 FNDC5Q8NAU1 212 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 OR7D4Q8NG98 312 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 EEF1AKMT1Q8WVE0 214 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 RMDN1Q96DB5 314 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 DERL2Q9GZP9 239 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 TAS2R13Q9NYV9 303 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 PCTPQ9UKL6 214 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 SLC12A8A0AV02 714 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 LCHNA4D1U4 455 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 NOBOXO60393 691 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 EEDO75530 441 aaKnown RBP9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 LDLRP01130 860 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 APOA1P02647 267 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 FGF1P05230 155 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 PRKCAP17252 672 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 ATF4P18848 351 aaPredicted RBP9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 POLR2EP19388 210 aaKnown RBP9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 CXCR2P25025 360 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 SHMT2P34897 504 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 KCNQ1P51787 676 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 GNG2P59768 71 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 EPS8Q12929 822 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 DGUOKQ16854 277 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 TYSND1Q2T9J0 566 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 LRIT3Q3SXY7 679 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 XKR7Q5GH72 579 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 C6orf136Q5SQH8 315 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 C10orf120Q5SQS8 335 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 CCNYL2Q5T2Q4 361 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 SPRYD7Q5W111 196 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 GLYATQ6IB77 296 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 SERINC5Q86VE9 423 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 UBE2J2Q8N2K1 259 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 FAM86B1Q8N7N1 296 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 FAR1Q8WVX9 515 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 SARS2Q9NP81 518 aaKnown RBP9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 PCDH10Q9P2E7 1040 aa9.24□□□□□ -0.93
HLA-DOA-201ENST00000229829 NUAK1O60285 661 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 TSPAN12O95859 305 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 ZNF16P17020 682 aaPredicted RBP9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 HLA-DPA1P20036 260 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 ADARB1P78563 741 aaKnown RBP9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 TRIM60Q495X7 471 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 LYPD8Q6UX82 237 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 HS3ST5Q8IZT8 346 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 OR8H2Q8N162 312 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 DTWD1Q8N5C7 304 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 CELF2-AS1Q8N7Q2 184 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 MCFD2Q8NI22 146 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 BTN2A3PQ96KV6 586 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 TRIB3Q96RU7 358 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 HOXD1Q9GZZ0 328 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 CCSER2Q9H7U1 834 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 CARS2Q9HA77 564 aaKnown RBP9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 CCDC177Q9NQR7 707 aaPredicted RBP9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 TRMT13Q9NUP7 481 aaKnown RBP9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 TOR4AQ9NXH8 423 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 MARCH2Q9P0N8 246 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 SLCO3A1Q9UIG8 710 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 UTS2RQ9UKP6 389 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 UPK1AO00322 258 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 XPNPEP2O43895 674 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 PRAMEF11O60813 436 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 CPNE3O75131 537 aaKnown RBP9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 NDUFS3O75489 264 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 SERPINF2P08697 491 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 MLLT3P42568 568 aaPredicted RBP9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 ERVPABLB-1P60509 514 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 RAD51Q06609 339 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 TAF10Q12962 218 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 LETMD1Q6P1Q0 360 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 USP51Q70EK9 711 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 TBC1D21Q8IYX1 336 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 ATP6V0D2Q8N8Y2 350 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 PROX1Q92786 737 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 ITCHQ96J02 903 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 FEM1AQ9BSK4 669 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 CRISPLD1Q9H336 500 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 ACTL8Q9H568 366 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 SYTL2Q9HCH5 934 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 STMN3Q9NZ72 180 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 IL37Q9NZH6 218 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 FNIP2Q9P278 1114 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 PCDHGC4Q9Y5F7 938 aa9.23□□□□□ -0.93
HLA-DOA-201ENST00000229829 LOC100506127A0A0U1RQW1 187 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 C12orf71A8MTZ7 269 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 HOXC11O43248 304 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 EIF2S1P05198 315 aaKnown RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 G6PDP11413 515 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 OGNP20774 298 aaKnown RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 HTR1BP28222 390 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 979.6 ms