RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MYBPHLA2RUH7 354 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 PCDHGA12O60330 932 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 CXCR1P25024 350 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 EOGTQ5NDL2 527 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 LPCAT4Q643R3 524 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 GDPD4Q6W3E5 623 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 MON1BQ7L1V2 547 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 IRF2BP2Q7Z5L9 587 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 PLD5Q8N7P1 536 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 TBX5Q99593 518 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 LGR4Q9BXB1 951 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 IL1RAPQ9NPH3 570 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 MROH2AA6NES4 1674 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 SERPINA3P01011 423 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 CD48P09326 243 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 ECT2LQ008S8 904 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 HYAL2Q12891 473 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 GSTCDQ8NEC7 633 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 MCFD2Q8NI22 146 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 FBXW11Q9UKB1 542 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 CLEC3AO75596 197 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 SASH3O75995 380 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 STATHP02808 62 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 NSG1P42857 185 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 MLIPQ5VWP3 458 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 SLC44A1Q8WWI5 657 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 TBC1D17Q9HA65 648 aa13.03□□□□□ -0.32
COL1A1-201ENST00000225964 PEX12O00623 359 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 PBX3P40426 434 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 ABCA11PQ4W5N1 156 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 QSOX2Q6ZRP7 698 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 UBE2J2Q8N2K1 259 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 ZNF615Q8N8J6 731 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 DBF4BQ8NFT6 615 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 OR6K6Q8NGW6 343 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 ALG2Q9H553 416 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 MKKSQ9NPJ1 570 aaPredicted RBP13.02□□□□□ -0.32
COL1A1-201ENST00000225964 B3GAT2Q9NPZ5 323 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 GDAP2Q9NXN4 497 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 FKBP7Q9Y680 259 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 KIDINS220Q9ULH0 1771 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 KIF1AQ12756 1690 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 VSTM5A8MXK1 200 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 NDUFS4O43181 175 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 LILRA4P59901 499 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 DCAKDQ8WVC6 231 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 HNRNPABQ99729 332 aaKnown RBP13.02□□□□□ -0.32
COL1A1-201ENST00000225964 TCF7L1Q9HCS4 588 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 CDC14AQ9UNH5 594 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 MAFBQ9Y5Q3 323 aaPredicted RBP13.02□□□□□ -0.32
COL1A1-201ENST00000225964 AFDNP55196 1824 aaKnown RBP13.02□□□□□ -0.32
COL1A1-201ENST00000225964 H0YGN5 161 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 CPNE3O75131 537 aaKnown RBP13.02□□□□□ -0.32
COL1A1-201ENST00000225964 GADD45GO95257 159 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 MYCLP1P12525 358 aaPredicted RBP13.02□□□□□ -0.32
COL1A1-201ENST00000225964 HOXB6P17509 224 aaKnown RBP13.02□□□□□ -0.32
COL1A1-201ENST00000225964 ECHS1P30084 290 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 RAB30Q15771 203 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 LINGO2Q7L985 606 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 CAND1Q86VP6 1230 aaKnown RBP13.02□□□□□ -0.32
COL1A1-201ENST00000225964 FAM46DQ8NEK8 389 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 KLRF1Q9NZS2 232 aa13.02□□□□□ -0.32
COL1A1-201ENST00000225964 ROBO3Q96MS0 1386 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 CCL5P13501 91 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 PRMT2P55345 433 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 BTN3A2P78410 334 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 KLF10Q13118 480 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 CCL14Q16627 93 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF613Q6PF04 617 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF627Q7L945 461 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 SYT17Q9BSW7 474 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 ARL8BQ9NVJ2 186 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 WNT9AO14904 365 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 IL33O95760 270 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 MT-ND1P03886 318 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 MPIP34949 423 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 MXD1Q05195 221 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 ARHGAP40Q5TG30 622 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 NAPRTQ6XQN6 538 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 C1orf216Q8TAB5 229 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 ZBED6CLQ96FA7 236 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-201ENST00000225964 DIRAS2Q96HU8 199 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 CCDC115Q96NT0 180 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 ERVK-5Q9HDB9 667 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 IFT80Q9P2H3 777 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-201ENST00000225964 PIP5K1BO14986 540 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 TBX1O43435 398 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 AOC2O75106 756 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 NCK1P16333 377 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 L1CAMP32004 1257 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 VWA5B1Q5TIE3 1220 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 AHSA2Q719I0 299 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 ARL10Q8N8L6 244 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 MNTQ99583 582 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 FANCFQ9NPI8 374 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 CTPS2Q9NRF8 586 aa13.02□□□□□ -0.33
COL1A1-201ENST00000225964 FARSBQ9NSD9 589 aaKnown RBP13.02□□□□□ -0.33
COL1A1-201ENST00000225964 PLK4O00444 970 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 CYP17A1P05093 508 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms