RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 CDC26Q8NHZ8 85 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 GTF2H4Q92759 462 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 RHBDF1Q96CC6 855 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 LRTM1Q9HBL6 345 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 ARL15Q9NXU5 204 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 IFT80Q9P2H3 777 aaPredicted RBP14.33□□□□□ -0.12
CNOT3-201ENST00000221232 INVSQ9Y283 1065 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 ANKRD36A6QL64 1941 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 UPK1AO00322 258 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 PGRP06401 933 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 UMPSP11172 480 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 CDH1P12830 882 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 ACRV1P26436 265 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 GNPDA1P46926 289 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 SH3BGRP55822 239 aaPredicted RBP14.32□□□□□ -0.12
CNOT3-201ENST00000221232 SF1Q15637 639 aaKnown RBP14.32□□□□□ -0.12
CNOT3-201ENST00000221232 ZBED5Q49AG3 693 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 KCTD21Q4G0X4 260 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 GALNT10Q86SR1 603 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 RIMKLAQ8IXN7 391 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 TNIP2Q8NFZ5 429 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 BPIFB1Q8TDL5 484 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 ITFG2Q969R8 447 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 ALG14Q96F25 216 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 EGLN2Q96KS0 407 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 MAGEL2Q9UJ55 1249 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 FAF1Q9UNN5 650 aaPredicted RBP14.32□□□□□ -0.12
CNOT3-201ENST00000221232 CCL27Q9Y4X3 112 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 NRG2O14511 850 aaPredicted RBP14.32□□□□□ -0.12
CNOT3-201ENST00000221232 EPB42P16452 691 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 AKT1P31749 480 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 CYP4F3Q08477 520 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 CRY1Q16526 586 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 FGD3Q5JSP0 725 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 SPESP1Q6UW49 350 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 CERS6Q6ZMG9 384 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 HS6ST3Q8IZP7 471 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 PPP3R2Q96LZ3 170 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 TMEM175Q9BSA9 504 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 INPP5KQ9BT40 448 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 GALNT8Q9NY28 637 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 CFAP97Q9P2B7 532 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 AASSQ9UDR5 926 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 DLGAP4Q9Y2H0 992 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 NEUROG3Q9Y4Z2 214 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 OARD1Q9Y530 152 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 NUP214P35658 2090 aaPredicted RBP14.32□□□□□ -0.12
CNOT3-201ENST00000221232 G3V2T6 193 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 PFDN1O60925 122 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 PARNO95453 639 aaKnown RBP14.32□□□□□ -0.12
CNOT3-201ENST00000221232 GLUD1P00367 558 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 GGT1P19440 569 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 CD247P20963 164 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 TACR1P25103 407 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 RPIAP49247 311 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 PHC1P78364 1004 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 LMAN2Q12907 356 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 BOP1Q14137 746 aaKnown RBP14.32□□□□□ -0.12
CNOT3-201ENST00000221232 C16orf72Q14CZ0 275 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 RETSATQ6NUM9 610 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 XKR5Q6UX68 686 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 CMTM8Q8IZV2 173 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 DPP10Q8N608 796 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 HJURPQ8NCD3 748 aaPredicted RBP14.32□□□□□ -0.12
CNOT3-201ENST00000221232 PAPD5Q8NDF8 572 aaKnown RBP14.32□□□□□ -0.12
CNOT3-201ENST00000221232 ATG10Q9H0Y0 220 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 TOR3AQ9H497 397 aa14.32□□□□□ -0.12
CNOT3-201ENST00000221232 K7EPI3 171 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 MANBAO00462 879 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 DEAF1O75398 565 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-201ENST00000221232 STK16O75716 305 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 PDYNP01213 254 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 TFPTP0C1Z6 253 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 RAP2AP10114 183 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 ITPKAP23677 461 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 PSMA3P25788 255 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 GABRR2P28476 465 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 ADARP55265 1226 aaKnown RBP14.31□□□□□ -0.12
CNOT3-201ENST00000221232 KIAA0040Q15053 153 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 ATP13A5Q4VNC0 1218 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 GPRC6AQ5T6X5 926 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 GPR180Q86V85 440 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 ZDHHC13Q8IUH4 622 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 MSRB3Q8IXL7 192 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 PDPRQ8NCN5 879 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 BPIFB6Q8NFQ5 453 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 SNRNP27Q8WVK2 155 aaKnown RBP14.31□□□□□ -0.12
CNOT3-201ENST00000221232 PDLIM5Q96HC4 596 aaKnown RBP14.31□□□□□ -0.12
CNOT3-201ENST00000221232 C2orf49Q9BVC5 232 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-201ENST00000221232 FANCEQ9HB96 536 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 FRMPD3Q5JV73 1810 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 CASP8AP2Q9UKL3 1982 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 PTGES3LE9PB15 166 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 AREL1O15033 823 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 E2F6O75461 281 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 BCKDHAP12694 445 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 DCTN2Q13561 401 aaKnown RBP14.31□□□□□ -0.12
CNOT3-201ENST00000221232 SPIDRQ14159 915 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 MEP1AQ16819 746 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 ANKDD1AQ495B1 522 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms