RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 HTR1AP08908 422 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 EBLN1P0CF75 366 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 PIGAP37287 484 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 CD97P48960 835 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 IST1P53990 364 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 TRIM32Q13049 653 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 KCNAB2Q13303 367 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 RFX4Q33E94 735 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 SPANXN4Q5MJ08 99 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 RTP2Q5QGT7 225 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 FUT10Q6P4F1 479 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 ANKS3Q6ZW76 656 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 SERPINA9Q86WD7 417 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 LIX1Q8N485 282 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 CHPT1Q8WUD6 406 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 MUL1Q969V5 352 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 RHBDF1Q96CC6 855 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 EID2BQ96D98 161 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 NTMT1Q9BV86 223 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 KAT8Q9H7Z6 458 aaKnown RBP13.04□□□□□ -0.32
SRP54-201ENST00000216774 LRTM1Q9HBL6 345 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 PCDHB9Q9Y5E1 797 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 ERN1O75460 977 aaKnown RBP13.04□□□□□ -0.32
SRP54-201ENST00000216774 PRAMEF1O95521 474 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 GUCA1CO95843 209 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 TFPTP0C1Z6 253 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 ITIH1P19827 911 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 FCGRTP55899 365 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 CD47Q08722 323 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 CRHR2Q13324 411 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 BFSP2Q13515 415 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 PON2Q15165 354 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 MEP1AQ16819 746 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 CTU2Q2VPK5 515 aaKnown RBP13.04□□□□□ -0.32
SRP54-201ENST00000216774 PLA2G4EQ3MJ16 856 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 SPESP1Q6UW49 350 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 LINGO4Q6UY18 593 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 FKBP10Q96AY3 582 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 CCDC138Q96M89 665 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 OR52E6Q96RD3 313 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 CSF3RQ99062 836 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 EGFL8Q99944 293 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 SLC29A3Q9BZD2 475 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 WWOXQ9NZC7 414 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 TSR3Q9UJK0 312 aaKnown RBP13.04□□□□□ -0.32
SRP54-201ENST00000216774 SNX5Q9Y5X3 404 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 A0A0U1RQS6 177 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 LOC100130705A0A1B0GUX0 176 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 SOBPA7XYQ1 873 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 K7EPI3 171 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 MANBAO00462 879 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 FFAR3O14843 346 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 SLC16A6O15403 523 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 GPR42O15529 346 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 NOBOXO60393 691 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 SEC22BO75396 215 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 RECQL5O94762 991 aaPredicted RBP13.03□□□□□ -0.32
SRP54-201ENST00000216774 OCM2P0CE71 109 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 OCMP0CE72 109 aaPredicted RBP13.03□□□□□ -0.32
SRP54-201ENST00000216774 RYKP34925 604 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 DCTP40126 519 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 PIK3CGP48736 1102 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 ISL1P61371 349 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 IMPG1Q17R60 797 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 ZNF691Q5VV52 312 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 LYPLAL1Q5VWZ2 237 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 SNX20Q7Z614 316 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 CALHM3Q86XJ0 350 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 HIPK1Q86Z02 1210 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 SLC15A4Q8N697 577 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 USP7Q93009 1102 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 ZNF566Q969W8 418 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 ELAC1Q9H777 363 aaKnown RBP13.03□□□□□ -0.32
SRP54-201ENST00000216774 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 C1orf109Q9NX04 203 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 KLQ9UEF7 1012 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 ZNF490Q9ULM2 529 aaPredicted RBP13.03□□□□□ -0.32
SRP54-201ENST00000216774 GABRQQ9UN88 632 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 ORC6Q9Y5N6 252 aa13.03□□□□□ -0.32
SRP54-201ENST00000216774 CFAP99D6REC4 459 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 GAPDHSO14556 408 aaPredicted RBP13.02□□□□□ -0.32
SRP54-201ENST00000216774 CREG1O75629 220 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 SULT1C4O75897 302 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 CCDC159P0C7I6 412 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 EPB42P16452 691 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 PCSK2P16519 638 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 SLC11A1P49279 550 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 FLT3LGP49771 235 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 MAPK10P53779 464 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 RAD23AP54725 363 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 RHOAP61586 193 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 AP1S1P61966 158 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 PHEXP78562 749 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 HMGCS1Q01581 520 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 GSTM4Q03013 218 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 NFATC2Q13469 925 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 LAPTM5Q13571 262 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 PHKG1Q16816 387 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 LRIF1Q5T3J3 769 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms