RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 HHIPL2Q6UWX4 724 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 TREML1Q86YW5 311 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 CBR4Q8N4T8 237 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 OR4M2Q8NGB6 313 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 HMGXB4Q9UGU5 601 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 SH2B3Q9UQQ2 575 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 CTNNB1P35222 781 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 TXNRD3Q86VQ6 643 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 SLC38A3Q99624 504 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 A0A1W2PRQ8 180 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 ELOA3DA6NLF2 546 aaPredicted RBP14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 RHPN2P1A8MT19 583 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 KCNU1A8MYU2 1149 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 CHMP24386 653 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 FOXM1Q08050 763 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 ELOA3BQ3SY89 546 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 WSCD1Q658N2 575 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 CLEC6AQ6EIG7 209 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 CLEC17AQ6ZS10 378 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 ZSCAN1Q8NBB4 408 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 ELOA3Q8NG57 546 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 OR10A6Q8NH74 314 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 PGM2Q96G03 612 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 COPS8Q99627 209 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 TVP23BQ9NYZ1 205 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 SLC27A5Q9Y2P5 690 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 DPPA5A6NC42 116 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 NKRFO15226 690 aaKnown RBP eCLIP14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 TGDSO95455 350 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 XKP51811 444 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 GTF2H2Q13888 395 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 GTF2H2CQ6P1K8 395 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 ZNF280BQ86YH2 543 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 CDC42BPAQ5VT25 1732 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 BORCS7-ASMTA0A0B4J1R7 106 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 UGT2B4P06133 528 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 DLSTP36957 453 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 GRIA1P42261 906 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 BORCS7Q96B45 105 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 KCNC2Q96PR1 638 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 NRCAMQ92823 1304 aa14.39□□□□□ -0.11
SPTLC2-201ENST00000216484 TRAFD1O14545 582 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 TRAPPC6AO75865 159 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 ACADVLP49748 655 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 BNIP3Q12983 259 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 RHBDF2Q6PJF5 856 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 GPR151Q8TDV0 419 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 PEX13Q92968 403 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 WACQ9BTA9 647 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 CXorf21Q9HAI6 301 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 FZD3Q9NPG1 666 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 ENTPD6O75354 484 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 GLDCP23378 1020 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 PSMD8P48556 350 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 ZNF143P52747 638 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 PSMA6P60900 246 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 MAMLD1Q13495 774 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 ZACNQ401N2 412 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 RAB2BQ8WUD1 216 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 C14orf105Q9NVL8 296 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 ZNF175Q9Y473 711 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 SCN8AQ9UQD0 1980 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 CLCA1A8K7I4 914 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 SLC35G6P0C7Q6 338 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 GSTT2P0CG29 244 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 KELP23276 732 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 GNMTQ14749 295 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 NFASCO94856 1347 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 FBP2O00757 339 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 PCDHGA12O60330 932 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 IFNA10P01566 189 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 MYCLP1P12525 358 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 EPCAMP16422 314 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 CD36P16671 472 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 MPSTP25325 297 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 CSTF2P33240 577 aaKnown RBP eCLIP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 NDUFV1P49821 464 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 UGT8Q16880 541 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 IQCCQ4KMZ1 466 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 GPR153Q6NV75 609 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 DNAJB7Q7Z6W7 309 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 LIX1Q8N485 282 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 GMCL1P1Q8NEA9 526 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 GNG8Q9UK08 70 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 PEPDP12955 493 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 NR0B1P51843 470 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 ATXN7L3Q14CW9 347 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 ANKS1BQ7Z6G8 1248 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 ZDHHC21Q8IVQ6 265 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 PRSS58Q8IYP2 241 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 SVOPLQ8N434 492 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 S100A16Q96FQ6 103 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 USP42Q9H9J4 1324 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 KIAA0100Q14667 2235 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 NUP214P35658 2090 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 SULT1B1O43704 296 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 LIASO43766 372 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 WDPCPO95876 746 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 CASRP41180 1078 aa14.38□□□□□ -0.11
SPTLC2-201ENST00000216484 KLHL6Q8WZ60 621 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms