RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 EOGTQ5NDL2 527 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PTCRAQ6ISU1 281 aaPredicted RBP19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 XKR5Q6UX68 686 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 GPRIN3Q6ZVF9 776 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 C11orf96Q7Z7L8 435 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ARHGAP24Q8N264 748 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 POU5F2Q8N7G0 328 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ACTRT2Q8TDY3 377 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 HIST1H2AHQ96KK5 128 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 C3orf30Q96M34 536 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 CDK15Q96Q40 435 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 HIST1H2AJQ99878 128 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 H2AFJQ9BTM1 129 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TRIM54Q9BYV2 358 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TUBB1Q9H4B7 451 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 MMP17Q9ULZ9 603 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PTGDR2Q9Y5Y4 395 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ATP6AP2A0A1C7CYW4 349 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 OR7A17O14581 309 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 GIPC1O14908 333 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 CCNT2O60583 730 aaKnown RBP19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PSIP1O75475 530 aaKnown RBP19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ATP6AP2O75787 350 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 FOSL2P15408 326 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 NDUFV2P19404 249 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 CYP2A7P20853 494 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TRIM23P36406 574 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 LEXMQ3ZCV2 418 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 METTL2BQ6P1Q9 378 aaKnown RBP19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 CRTC3Q6UUV7 619 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 USP30Q70CQ3 517 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 KBTBD6Q86V97 674 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 SCUBE1Q8IWY4 988 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 THTPAQ9BU02 230 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TEX101Q9BY14 249 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 SLC17A9Q9BYT1 436 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ZNF385DQ9H6B1 395 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 IPPKQ9H8X2 491 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 OPTCQ9UBM4 332 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 NDRG2Q9UN36 371 aaKnown RBP19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TIMM22Q9Y584 194 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 OR1A2Q9Y585 309 aa19.23■□□□□ 0.67
TNFRSF1A-201ENST00000162749 LIN7AO14910 233 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PIP5K1BO14986 540 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 RNGTTO60942 597 aaKnown RBP19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 OR4F21O95013 312 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PSMG1O95456 288 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 GGT5P36269 586 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 AP1S2P56377 157 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ERVPABLB-1P60509 514 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ABRQ12979 859 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 SGCGQ13326 291 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 RCN1Q15293 331 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 DNAL1Q4LDG9 190 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 LETMD1Q6P1Q0 360 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 DOK6Q6PKX4 331 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 CFAP206Q8IYR0 622 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ULK2Q8IYT8 1036 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 MCOLN3Q8TDD5 553 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 FOXJ1Q92949 421 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 GUCD1Q96NT3 240 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 WDR26Q9H7D7 661 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 LRRC42Q9Y546 428 aa19.22■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3DA0A087WVF3 549 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3IA0A087WXS9 549 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3EA0A087X179 549 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3KA0A087X1G2 549 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3FA6NER0 549 aaPredicted RBP19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3LB9A6J9 549 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 K7EPI3 171 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 CRCPO75575 148 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 STK16O75716 305 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3HP0C7X1 549 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 UROSP10746 265 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PKNOX1P55347 436 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TRAF3Q13114 568 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 MAP7D1Q3KQU3 841 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3GQ6DHY5 549 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3CQ6IPX1 549 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 LARP4Q71RC2 724 aaKnown RBP eCLIP19.21■□□□□ 0.677e-7■□□□□ 9.9
TNFRSF1A-201ENST00000162749 FAM124AQ86V42 546 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 HORMAD1Q86X24 394 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TBC1D3Q8IZP1 549 aaPredicted RBP19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 CFAP61Q8NHU2 1237 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 CATSPER2Q96P56 530 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PREBQ9HCU5 417 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 SLC7A8Q9UHI5 535 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 G3BP2Q9UN86 482 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PRKAB1Q9Y478 270 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ST14Q9Y5Y6 855 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 GON4LQ3T8J9 2241 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PCM1Q15154 2024 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 C17orf113A0A1B0GUU1 675 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ARHGEF33A8MVX0 844 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 H3BM21 787 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 POP7O75817 140 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 IL9P15248 144 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TEAD1P28347 426 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms