RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Hmgb3O54879 200 aaKnown RBP21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Trpv1Q704Y3 839 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Bbs4Q8C1Z7 520 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Scamp5Q9JKD3 235 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Lmx1aQ9JKU8 382 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Mpp5Q9JLB2 675 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Creb3l1Q9Z125 519 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 A0A286YDU1 74 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Znf366Q6NS86 746 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Scn4bQ7M729 228 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Mettl6Q8BVH9 282 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Olfr1311Q8VET0 312 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Gjd3Q91YD1 278 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Tspan1Q99J59 240 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Cdh22Q9WTP5 813 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Gm6356L7N2A7 188 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Clcn7O70496 803 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Pgk1P09411 417 aaKnown RBP21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 ErfP70459 551 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Hectd3Q3U487 861 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 MyrflQ3UN70 904 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Ipcef1Q5DU31 406 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Rbm18Q9CR83 190 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Ttyh1Q9D3A9 450 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Tbc1d21Q9D9D3 336 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Lbx2Q9WUN8 195 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Xlr4aA2BI40 215 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Hsd17b10O08756 261 aaKnown RBP21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Btbd1P58544 488 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Ikzf2P81183 526 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 KrtdapQ3V2T4 102 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Foxd1Q61345 456 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Fbxo42Q6PDJ6 717 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Psd4Q8BLR5 1005 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Acot4Q8BWN8 421 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Dnm1lQ8K1M6 742 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Diras1Q91Z61 198 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Pycr2Q922Q4 320 aaKnown RBP21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Glod4Q9CPV4 298 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 5330417H12RikQ9D3P2 110 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 1700018B08RikQ9DA83 213 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Olfr1508Q9R0K4 310 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Nfat5Q9WV30 1534 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Cyp4a10O88833 509 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 CskP41241 450 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Mc1rQ01727 315 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Zfp935Q14DI0 353 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Zdhhc14Q8BQQ1 489 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Thap1Q8CHW1 210 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Ift80Q8K057 777 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Ccdc3Q9D6Y1 273 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Krt81Q9ERE2 481 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 DguokQ9QX60 277 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 Galk1Q9R0N0 392 aa21.28■■□□□ 1
Smarcc1-201ENSMUST00000088716 F6Y6L6 278 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 NapsaO09043 419 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 SqleP52019 572 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Ddx4Q61496 702 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 OgnQ62000 298 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Sat2Q6P8J2 170 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Tas2r106Q7M724 308 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Tmem214Q8BM55 687 aaKnown RBP21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Sgpl1Q8R0X7 568 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 MthfrQ9WU20 654 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 4930579F01RikE9Q3L6 325 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Pold1P52431 1105 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Nr2e1Q64104 385 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Cyp4b1Q64462 511 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 PtprcapQ64697 197 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Nup54Q8BTS4 510 aaKnown RBP21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Zmiz2Q8CIE2 920 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Mrpl48Q8JZS9 211 aaKnown RBP21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Tdrd12Q9CWU0 1215 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Olfr731F8VQB9 326 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Sh3pxd2aO89032 1124 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Gm813Q3UWK9 176 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Cyth4Q80YW0 393 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Gspt1Q8R050 636 aaKnown RBP21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Slc25a11Q9CR62 314 aaKnown RBP21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Trmt10bQ9D075 318 aa21.27■■□□□ 1
Smarcc1-201ENSMUST00000088716 Nrp2O35375 931 aa21.27■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 GnazO70443 355 aa21.27■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Fabp3P11404 133 aa21.27■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 AcadsQ07417 412 aaKnown RBP21.27■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 FaddQ61160 205 aa21.27■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Q8BHG2 160 aa21.27■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Dmtf1Q8CE22 761 aa21.27■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Sppl2aQ9JJF9 523 aa21.27■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Slc7a5Q9Z127 512 aa21.27■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Pramef17A2ASJ1 475 aa21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 AdaP03958 352 aa21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Usp43Q8BUM9 1132 aa21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Camkk1Q8VBY2 505 aa21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Cryl1Q99KP3 319 aa21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Cdkn2aipnlQ9D211 116 aaKnown RBP21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Fbxl12Q9EPX5 326 aa21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Cxcl12P40224 93 aa21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Pld2P97813 933 aa21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 AtminQ6P9S1 818 aa21.26■□□□□ 0.99
Smarcc1-201ENSMUST00000088716 Prl3a1Q78Y73 227 aa21.26■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms