RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Tsen15Q8R3W5 168 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Imp4Q8VHZ7 291 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Asb6Q91ZU1 418 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Atp5f1Q9CQQ7 256 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Sertad3Q9ERC3 197 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Col22a1E9Q7P1 1613 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm7945F6QI24 236 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc32a1O35633 525 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hcn4O70507 1186 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 LynP25911 512 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cdk18Q04899 451 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Bcl2a1bQ497M6 172 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Orm1Q60590 207 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Itm2aQ61500 263 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Trim45Q6PFY8 580 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mrps7Q80X85 242 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Itln1bQ80ZA0 313 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Arl15Q8BGR6 204 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ppm1lQ8BHN0 360 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mbtps2Q8CHX6 515 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr586Q8VH13 317 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pcdhgc3Q91XX1 934 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 SardhQ99LB7 919 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Prkar1aQ9DBC7 381 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vmn1r49Q9WUF1 310 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tnfrsf25B1AWN9 411 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cldn34b1B1AZQ8 209 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Lrrc31F6VYM1 502 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Anxa3O35639 323 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Plpp4Q0VBU9 271 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fam171bQ14CH0 825 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rnf157Q3TEL6 685 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Bpifb1Q61114 474 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cntn2Q61330 1040 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ubap2lQ80X50 1107 aaKnown RBP10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 TbccQ8VCN9 341 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 ApofQ91V80 315 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mtif3Q9CZD5 276 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cldn34b2Q9D9N2 209 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ssr3Q9DCF9 185 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Jph1Q9ET80 660 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Zscan4eA0A1B0GRE8 505 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Trmt1lA2RSY6 728 aaKnown RBP10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 TagapB2RWW0 714 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Sec14l5B2RXM5 696 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Serpina3jD3Z451 420 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm14496K7N5U4 849 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rhox2gL7MUB9 191 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cyp2a4P15392 494 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cyp2a5P20852 494 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Il12aP43431 215 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 OcmP51879 109 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Flt3Q00342 1000 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Padi2Q08642 673 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ap4e1Q80V94 1122 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Bbs4Q8C1Z7 520 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Bend5Q8C6D4 421 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 AcmsdQ8R519 336 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr809Q8VEX8 328 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ptbp2Q91Z31 531 aaKnown RBP10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slamf1Q9QUM4 343 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Znf536Q8K083 1302 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Klhl32A2AJX0 620 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slfn9B1ARD6 910 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Speer4eK7N6S8 255 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Smpd2O70572 419 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Kcnj9P48543 393 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 WasP70315 520 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rars2Q3U186 578 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Upf3aQ3ULJ3 422 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cnksr3Q8BMA3 555 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Trmt2bQ8BQJ6 493 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Atp6v1hQ8BVE3 483 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tbl3Q8C4J7 801 aaKnown RBP10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Sit1Q8C503 180 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pofut2Q8VHI3 429 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tmem159Q922Z1 161 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Aco2Q99KI0 780 aaKnown RBP10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 ProzQ9CQW3 399 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Q9DA42 136 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 P33monoxQ9DBN4 303 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ralgps2Q9ERD6 590 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Htr3bQ9JHJ5 437 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cdh17Q9R100 827 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vmn2r125D3Z3M1 369 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Stc1O55183 247 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 ApoeP08226 311 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 SpnP15702 395 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Wnt7bP28047 349 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 SnnP61807 88 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tbx4P70325 552 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 AnpepP97449 966 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Emx2Q04744 253 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rbm15Q0VBL3 962 aaKnown RBP10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 RogdiQ3TDK6 287 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Naf1Q3UMQ8 489 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm1587Q3UT80 123 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 PmlQ60953 885 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Crtc1Q68ED7 630 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Psd2Q6P1I6 770 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms