RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Vmn2r61L7N2B8 865 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Hoxa9P09631 271 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Akt1P31750 480 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Hsd11b2P51661 386 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Polr2lP62876 67 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Nr6a1Q64249 495 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Pcdhga7Q6DD96 935 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Lair1Q8BG84 263 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Ankrd9Q8BH83 326 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Trim35Q8C006 501 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Tgif2Q8C0Y1 237 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Tcf25Q8R3L2 676 aaKnown RBP20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Cyb5r1Q9DB73 305 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 CtsrQ9JIA9 334 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 ArntlQ9WTL8 632 aa20.27■□□□□ 0.84
Cdx1-201ENSMUST00000025521 Tmem236A2ARJ3 344 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 FanceB8JJD6 213 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Gm43302L7N1X8 611 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Il4i1O09046 630 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Dnmt3aO88508 908 aaKnown RBP20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 P04213 122 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Esr1P19785 599 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Sstr3P30935 428 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Gbp10Q000W5 611 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Dusp2Q05922 318 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Tmem173Q3TBT3 378 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Taar7eQ5QD09 358 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Cdkn2cQ60772 168 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Amer3Q6NS69 780 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Znf280cQ6P3Y5 742 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Scn4bQ7M729 228 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Trmt2bQ8BQJ6 493 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Arhgap19Q8BRH3 494 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Nat14Q8BVG8 206 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Rbbp5Q8BX09 538 aaKnown RBP20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Creb5Q8K1L0 357 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Vmn1r214Q8R279 367 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 HnrnprQ8VHM5 632 aaKnown RBP20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Gstt3Q99L20 241 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Wdr6Q99ME2 1125 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Fam227aQ9D3V8 625 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Gsk3bQ9WV60 420 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 HttP42859 3119 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Itga8A2ARA8 1062 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Nt5c1aA3KFX0 365 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Ttll2A4Q9E4 540 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Phf11bB4XVQ1 276 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Rc3h2P0C090 1187 aaKnown RBP20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Resp18P47939 175 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 CdonQ32MD9 1250 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Olfml2bQ3V1G4 746 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Trpc1Q61056 793 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Creb3Q61817 404 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Sdr16c5Q7TQA3 309 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Thoc5Q8BKT7 683 aaKnown RBP20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Adipor2Q8BQS5 386 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Rbm34Q8C5L7 375 aaKnown RBP20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Olfr677Q8VF06 312 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Pcdhgc3Q91XX1 934 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Clic3Q9D7P7 237 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 PtsQ9R1Z7 144 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Psmd13Q9WVJ2 376 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Cd320Q9Z1P5 260 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 RgrQ9Z2B3 291 aa20.26■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Pabpc4lG5E8X2 370 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Cldn2O88552 230 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 ApoeP08226 311 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Ybx1P62960 322 aaKnown RBP20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 NficP70255 439 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Mmp11Q02853 492 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Tgm3Q08189 693 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Olfr1080Q7TR67 313 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 IpmkQ7TT16 396 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Gpr62Q80UC6 358 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 CpmQ80V42 443 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Zbtb24Q80X44 710 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Samd4aQ8CBY1 711 aaKnown RBP20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Slco3a1Q8R3L5 710 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Nudt7Q99P30 236 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Lsm7Q9CQQ8 103 aaKnown RBP20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 PacrglQ9D3X5 248 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Clec1bQ9JL99 229 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 VapaQ9WV55 249 aaKnown RBP20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 SufuQ9Z0P7 484 aa20.25■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Nipsnap3aB1AWZ3 247 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Fam71f2B2RXB0 297 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Ceacam3E9Q6J4 706 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Spdye4cI6XKQ3 339 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 RbpjlO08674 515 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Cer1O55233 272 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Dsc1P55849 886 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Lrig1P70193 1091 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 CamkmtQ3U2J5 323 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Trim67Q505D9 768 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Syce1lQ5D525 247 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Cpa6Q5U901 438 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Ablim3Q69ZX8 682 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Znf366Q6NS86 746 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Paqr3Q6TCG8 311 aa20.24■□□□□ 0.83
Cdx1-201ENSMUST00000025521 Olfr1197Q7TR13 314 aa20.24■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms