RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 NUFIP1Q9UHK0 495 aaKnown RBP13.52□□□□□ -0.24
SCARB2-227ENST00000640957 PKP3Q9Y446 797 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 ORC6Q9Y5N6 252 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 ACTL7AQ9Y615 435 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 MEIS3P2A8K0S8 358 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 IQCF5A8MTL0 148 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 CNMDO75829 334 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 IGFBP5P24593 272 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 ZFP36L2P47974 494 aaKnown RBP13.52□□□□□ -0.24
SCARB2-227ENST00000640957 NKX3-2P78367 333 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 GALK2Q01415 458 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 HMGCS1Q01581 520 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 RCAN2Q14206 197 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 CRY1Q16526 586 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 RUNDC3AQ59EK9 446 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 KIAA0319Q5VV43 1072 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 CLEC20AQ6ZU45 233 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 C7orf57Q8NEG2 295 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 TRIB2Q92519 343 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 EXOSC4Q9NPD3 245 aaKnown RBP13.52□□□□□ -0.24
SCARB2-227ENST00000640957 RPRD1BQ9NQG5 326 aaKnown RBP13.52□□□□□ -0.24
SCARB2-227ENST00000640957 TMEM39AQ9NV64 488 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 TRHDEQ9UKU6 1024 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 MYBPHLA2RUH7 354 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 CCDC162PA2VCL2 907 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 J3KR12 359 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 KMOO15229 486 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 GUCA1CO95843 209 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 CD1DP15813 335 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 S100A5P33763 92 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 PGFP49763 221 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 TAF6P49848 677 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 PPP2R2BQ00005 443 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 IHHQ14623 411 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 IRF3Q14653 427 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 RFTN2Q52LD8 501 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-227ENST00000640957 C9orf57Q5W0N0 161 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 LRRC8DQ7L1W4 858 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 CILP2Q8IUL8 1156 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 NETO1Q8TDF5 533 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 ZNF583Q96ND8 569 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 TSPAN18Q96SJ8 248 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 VAT1Q99536 393 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 TIGARQ9NQ88 270 aa13.52□□□□□ -0.25
SCARB2-227ENST00000640957 MOXD2PA6NHM9 499 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 ZW10O43264 779 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 CRYZL1O95825 349 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 SLC2A4P14672 509 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 ALDH6A1Q02252 535 aaKnown RBP13.51□□□□□ -0.25
SCARB2-227ENST00000640957 UBE3AQ05086 875 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 FAM174BQ3ZCQ3 159 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 CARD16Q5EG05 197 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 C6orf136Q5SQH8 315 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 ZDHHC17Q8IUH5 632 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 EID3Q8N140 333 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 SVOPQ8N4V2 548 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 ATG16L2Q8NAA4 619 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 GLB1L3Q8NCI6 653 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-227ENST00000640957 TNIP3Q96KP6 325 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 KAT8Q9H7Z6 458 aaKnown RBP13.51□□□□□ -0.25
SCARB2-227ENST00000640957 PCDH10Q9P2E7 1040 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 C3orf18Q9UK00 162 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 GABRQQ9UN88 632 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 AAR2Q9Y312 384 aaKnown RBP13.51□□□□□ -0.25
SCARB2-227ENST00000640957 AGAP5A6NIR3 686 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 ERVH48-1M5A8F1 160 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 LRATO95237 230 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 AQP1P29972 269 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 HTR2BP41595 481 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 PAMR1Q6UXH9 720 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 PAQR9Q6ZVX9 377 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 PAF1Q8N7H5 531 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 SCAMP5Q8TAC9 235 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 ACOT13Q9NPJ3 140 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 FBXO8Q9NRD0 319 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 TOR4AQ9NXH8 423 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 FBXL12Q9NXK8 326 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 MAT2BQ9NZL9 334 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 FBXW11Q9UKB1 542 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
SCARB2-227ENST00000640957 ABCG2Q9UNQ0 655 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 TANC1Q9C0D5 1861 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 RGS10O43665 173 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 RHOBTB1O94844 696 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 S1PR4O95977 384 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 CYP11A1P05108 521 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 NPR3P17342 541 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 SMPD1P17405 629 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 AFF1P51825 1210 aaKnown RBP13.51□□□□□ -0.25
SCARB2-227ENST00000640957 PRKG2Q13237 762 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 GBX1Q14549 363 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 ERAP2Q6P179 960 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 DLEU7Q6UYE1 221 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 VTCN1Q7Z7D3 282 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 IL17RDQ8NFM7 739 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 CNDP2Q96KP4 475 aaKnown RBP13.51□□□□□ -0.25
SCARB2-227ENST00000640957 MROH8Q9H579 483 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 TREX1Q9NSU2 369 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms