RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 PWP1Q13610 501 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 ZNF773Q6PK81 442 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 PNPT1Q8TCS8 783 aaKnown RBP14.33□□□□□ -0.12
SCARB2-221ENST00000640341 BPIFB1Q8TDL5 484 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 PEX13Q92968 403 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 EID2BQ96D98 161 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 VPS9D1Q9Y2B5 631 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 PRSS21Q9Y6M0 314 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 LOC730098B7Z3J9 87 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 H0Y858 1186 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 K7EPI3 171 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 UPK1AO00322 258 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 SERPINA1P01009 418 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 DCKP27707 260 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 CDH4P55283 916 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 TLR9Q9NR96 1032 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 ELOVL2Q9NXB9 296 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 CRLS1Q9UJA2 301 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 BAG5Q9UL15 447 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 ELOVL7A1L3X0 281 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 C2orf78A6NCI8 922 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 CXCR6O00574 342 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 KDELR3O43731 214 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 PGRP06401 933 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 MBL2P11226 248 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-221ENST00000640341 GGT1P19440 569 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 PLA2G16P53816 162 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 ARF5P84085 180 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 PLD1Q13393 1074 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 FAM117BQ6P1L5 589 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 FUT10Q6P4F1 479 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 CRTC3Q6UUV7 619 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 SBSNQ6UWP8 590 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 RBM23Q86U06 439 aaKnown RBP14.32□□□□□ -0.12
SCARB2-221ENST00000640341 TRIM74Q86UV6 250 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 TRIM73Q86UV7 250 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 ALDH16A1Q8IZ83 802 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 SLC22A17Q8WUG5 538 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 TANKQ92844 425 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 BORCS5Q969J3 196 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 FAM120BQ96EK7 910 aaKnown RBP14.32□□□□□ -0.12
SCARB2-221ENST00000640341 UGT2B28Q9BY64 529 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 AMBRA1Q9C0C7 1298 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 RIBC2Q9H4K1 309 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 PARVBQ9HBI1 364 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 HPS4Q9NQG7 708 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 FAM118AQ9NWS6 357 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 PDE10AQ9Y233 779 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 TBL1XO60907 577 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 INMTO95050 263 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 ESR1P03372 595 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 PTGER3P43115 390 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 CLCN7P51798 805 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 CD47Q08722 323 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 ADAMTSL2Q86TH1 951 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 SAPCD2Q86UD0 394 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 RGL4Q8IZJ4 473 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 C10orf111Q8N326 155 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 RNF175Q8N4F7 328 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 TNKS2Q9H2K2 1166 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 LRFN2Q9ULH4 789 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 DICER1Q9UPY3 1922 aaKnown RBP14.32□□□□□ -0.12
SCARB2-221ENST00000640341 DOCK4Q8N1I0 1966 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 CLDN7O95471 211 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 C1QCP02747 245 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 FMO3P31513 532 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 TTKP33981 857 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 CA8P35219 290 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 SLC11A1P49279 550 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 RAD23AP54725 363 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 KIAA1841Q6NSI8 718 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 BTLAQ7Z6A9 289 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 TMEM179BQ7Z7N9 219 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 TSPEARQ8WU66 669 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 ZIC5Q96T25 663 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 RNF38Q9H0F5 515 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 MUC13Q9H3R2 512 aa14.32□□□□□ -0.12
SCARB2-221ENST00000640341 ADAMTS4O75173 837 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 CLDN11O75508 207 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 MLLT10P55197 1068 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 DDX39BQ13838 428 aaKnown RBP14.31□□□□□ -0.12
SCARB2-221ENST00000640341 CTU2Q2VPK5 515 aaKnown RBP14.31□□□□□ -0.12
SCARB2-221ENST00000640341 ZNF829Q3KNS6 432 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-221ENST00000640341 CACHD1Q5VU97 1274 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 IFNL1Q8IU54 200 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 RIMKLAQ8IXN7 391 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 ADGRG2Q8IZP9 1017 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 CSF3RQ99062 836 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 TRNAU1APQ9NX07 287 aaKnown RBP14.31□□□□□ -0.12
SCARB2-221ENST00000640341 NUDT4Q9NZJ9 180 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 ST14Q9Y5Y6 855 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 RGS14O43566 566 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 VNN2O95498 520 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 IGLV3-27P01718 113 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 ZNF7P17097 686 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-221ENST00000640341 CRHBPP24387 322 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 RGS4P49798 205 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 HSPA14Q0VDF9 509 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 TRAF3Q13114 568 aa14.31□□□□□ -0.12
SCARB2-221ENST00000640341 HECTD3Q5T447 861 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms