RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 PTGR1Q14914 329 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 FAM174BQ3ZCQ3 159 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 ETFRF1Q6IPR1 90 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 PRR27Q6MZM9 219 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 Q6ZTK2 550 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 C1orf52Q8N6N3 182 aaKnown RBP6.17□□□□□ -1.42
RFC1-217ENST00000639695 Q8N9P0 234 aaPredicted RBP6.17□□□□□ -1.42
RFC1-217ENST00000639695 UXS1Q8NBZ7 420 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 NCOA7Q8NI08 942 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 HMGCLL1Q8TB92 370 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 UBLCP1Q8WVY7 318 aaPredicted RBP6.17□□□□□ -1.42
RFC1-217ENST00000639695 DDB2Q92466 427 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 ST6GALNAC6Q969X2 333 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 RUNDC3BQ96NL0 473 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 TMEM237Q96Q45 408 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 MTERF1Q99551 399 aaKnown RBP6.17□□□□□ -1.42
RFC1-217ENST00000639695 LMF2Q9BU23 707 aaKnown RBP6.17□□□□□ -1.42
RFC1-217ENST00000639695 CACNG6Q9BXT2 260 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 PRSS22Q9GZN4 317 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 SEMA6AQ9H2E6 1030 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 TUBA8Q9NY65 449 aaPredicted RBP6.17□□□□□ -1.42
RFC1-217ENST00000639695 EPS15L1Q9UBC2 864 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 RHCGQ9UBD6 479 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 AGTPBP1Q9UPW5 1226 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 ITM2BQ9Y287 266 aa6.17□□□□□ -1.42
RFC1-217ENST00000639695 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.17□□□□□ -1.425e-8■■■□□ 16
RFC1-217ENST00000639695 hDV102S1A0JD36 115 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 ADAM10O14672 748 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 SOX30O94993 753 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 INHBAP08476 426 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 DESP17661 470 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 HSD17B3P37058 310 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 LHX1P48742 406 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 NUDT6P53370 316 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 NME5P56597 212 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 TNK1Q13470 666 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 PPA1Q15181 289 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 RPS6KA1Q15418 735 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 DNAJC21Q5F1R6 531 aaKnown RBP6.16□□□□□ -1.42
RFC1-217ENST00000639695 C10orf25Q5T742 122 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 WDR73Q6P4I2 378 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 NOTUMQ6P988 496 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 TMEM182Q6ZP80 229 aaPredicted RBP6.16□□□□□ -1.42
RFC1-217ENST00000639695 TMPRSS11FQ6ZWK6 438 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 BTN2A1Q7KYR7 527 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 YTHDF3Q7Z739 585 aaKnown RBP6.16□□□□□ -1.42
RFC1-217ENST00000639695 CTU1Q7Z7A3 348 aaKnown RBP6.16□□□□□ -1.42
RFC1-217ENST00000639695 FOXP4Q8IVH2 680 aaPredicted RBP6.16□□□□□ -1.42
RFC1-217ENST00000639695 TMEM199Q8N511 208 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 RTL3Q8N8U3 475 aaKnown RBP6.16□□□□□ -1.42
RFC1-217ENST00000639695 LPCAT1Q8NF37 534 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 DBF4BQ8NFT6 615 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 OIT3Q8WWZ8 545 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 DPF1Q92782 380 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 MYNNQ9NPC7 610 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 IL19Q9UHD0 177 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 RNF150Q9ULK6 438 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 CHKBQ9Y259 395 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 PCDHGA1Q9Y5H4 931 aa6.16□□□□□ -1.42
RFC1-217ENST00000639695 IGHV4-28A0A0C4DH34 117 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 A0A1W2PPW3 197 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 SYCE3A1L190 88 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 OR2M5A3KFT3 312 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 WDR91A4D1P6 747 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 KRT87PA6NCN2 255 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 TMEM221A6NGB7 291 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 C15orf62A8K5M9 175 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 SOCS6O14544 535 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 ST8SIA3O43173 380 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 FGF2P09038 288 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 SPP1P10451 314 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 PCP11498 1178 aaKnown RBP6.15□□□□□ -1.42
RFC1-217ENST00000639695 TCF4P15884 667 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 CD22P20273 847 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 TNFRSF8P28908 595 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 EVCP57679 992 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 PTENP60484 403 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 TRIP6Q15654 476 aaKnown RBP6.15□□□□□ -1.42
RFC1-217ENST00000639695 TCTE1Q5JU00 501 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 SLC27A1Q6PCB7 646 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 RABEPKQ7Z6M1 372 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 MAP7D3Q8IWC1 876 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 PPFIBP2Q8ND30 876 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 ACVR1CQ8NER5 493 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 OR2AK2Q8NG84 335 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 B4GALNT2Q8NHY0 566 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 SEPT1Q8WYJ6 367 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 TAF4BQ92750 862 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 SYN2Q92777 582 aaPredicted RBP6.15□□□□□ -1.42
RFC1-217ENST00000639695 TXNDC15Q96J42 360 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 ZNF582Q96NG8 517 aaPredicted RBP6.15□□□□□ -1.42
RFC1-217ENST00000639695 GAL3ST4Q96RP7 486 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 AKIRIN1Q9H9L7 192 aaPredicted RBP6.15□□□□□ -1.42
RFC1-217ENST00000639695 CDH20Q9HBT6 801 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 PCDH9Q9HC56 1237 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 ANO10Q9NW15 660 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 FBXW2Q9UKT8 454 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 MTF2Q9Y483 593 aaPredicted RBP6.15□□□□□ -1.42
RFC1-217ENST00000639695 YIPF1Q9Y548 306 aa6.15□□□□□ -1.42
RFC1-217ENST00000639695 HS3ST3B1Q9Y662 390 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms