RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PLEKHS1Q5SXH7 462 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 PRAMEF17Q5VTA0 474 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 KCTD11Q693B1 232 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 TMTC1Q8IUR5 882 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 LRRC57Q8N9N7 239 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 CPT1BQ92523 772 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 LRRC45Q96CN5 670 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 TLR10Q9BXR5 811 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 LACRTQ9GZZ8 138 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 CHST8Q9H2A9 424 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 TFB2MQ9H5Q4 396 aaKnown RBP17.94■□□□□ 0.46
CLN6-220ENST00000637450 SYTL2Q9HCH5 934 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 REXO2Q9Y3B8 237 aaKnown RBP17.94■□□□□ 0.46
CLN6-220ENST00000637450 MEN1O00255 615 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 IFRD1O00458 451 aaPredicted RBP17.93■□□□□ 0.46
CLN6-220ENST00000637450 BTN3A3O00478 584 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 DDX3YO15523 660 aaKnown RBP17.93■□□□□ 0.46
CLN6-220ENST00000637450 RAB40ALP0C0E4 278 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 MSL3P1P0C860 447 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 PDHA2P29803 388 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 MLLT10P55197 1068 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 PARP6Q2NL67 630 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 ZRANB3Q5FWF4 1079 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 LCN10Q6JVE6 187 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 MICALCLQ6ZW33 695 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 SERPINA9Q86WD7 417 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 DSELQ8IZU8 1212 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 PHC3Q8NDX5 983 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 NRTNQ99748 197 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 PITPNM3Q9BZ71 974 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 MVB12BQ9H7P6 319 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 VPS37BQ9H9H4 285 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 FANCEQ9HB96 536 aa17.93■□□□□ 0.46
CLN6-220ENST00000637450 NLE1Q9NVX2 485 aaPredicted RBP17.93■□□□□ 0.46
CLN6-220ENST00000637450 GSAPA4D1B5 854 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 BTN3A1O00481 513 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 PRSS56P0CW18 603 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 TPH1P17752 444 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 RORAP35398 523 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 PREPP48147 710 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 ABRQ12979 859 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 RPA4Q13156 261 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 ZNF789Q5FWF6 425 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 CPZQ66K79 652 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 ARHGEF18Q6ZSZ5 1173 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 TAS2R42Q7RTR8 314 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 FAM71DQ8N9W8 422 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 OR52E1Q8NGJ3 308 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 OR1L3Q8NH93 324 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 ADAMTS17Q8TE56 1095 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 CDKN2AIPNLQ96HQ2 116 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 ING2Q9H160 280 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 MLXIPLQ9NP71 852 aa17.92■□□□□ 0.46
CLN6-220ENST00000637450 PCDHGA9Q9Y5G4 932 aaKnown RBP17.92■□□□□ 0.46
CLN6-220ENST00000637450 GRID2IPA4D2P6 1211 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 ARGFXA6NJG6 315 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 TMEM150CB9EJG8 249 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 IPO7O95373 1038 aaKnown RBP17.91■□□□□ 0.46
CLN6-220ENST00000637450 METTL18O95568 372 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 GSTM1P09488 218 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 ST6GAL1P15907 406 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 CCL11P51671 97 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 GSTM4Q03013 218 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 BOP1Q14137 746 aaKnown RBP17.91■□□□□ 0.46
CLN6-220ENST00000637450 ZNF449Q6P9G9 518 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 RAD9BQ6WBX8 426 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 AMIGO1Q86WK6 493 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 PIANPQ8IYJ0 282 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 ADGRF3Q8IZF5 1079 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 CLDN19Q8N6F1 224 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 ENDOVQ8N8Q3 282 aaKnown RBP17.91■□□□□ 0.46
CLN6-220ENST00000637450 TTC13Q8NBP0 860 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 TFGQ92734 400 aaPredicted RBP17.91■□□□□ 0.46
CLN6-220ENST00000637450 CLIP3Q96DZ5 547 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 TRAPPC9Q96Q05 1148 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 NLNQ9BYT8 704 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 LRRC40Q9H9A6 602 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 ACSS2Q9NR19 701 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 PCMTD2Q9NV79 361 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 SERTAD3Q9UJW9 196 aa17.91■□□□□ 0.46
CLN6-220ENST00000637450 GOLGA6L9A6NEM1 432 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 MAP3K7O43318 606 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 AP2A2O94973 939 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 CAPN1P07384 714 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 PSMA3P25788 255 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 ZNF75DP51815 510 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 CACNG1Q06432 222 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 CHAF1BQ13112 559 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 PRKG2Q13237 762 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 DBN1Q16643 649 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 PAPD7Q5XG87 772 aaKnown RBP17.9■□□□□ 0.46
CLN6-220ENST00000637450 ATCAYQ86WG3 371 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 FAM26EQ8N5C1 309 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 ACRBPQ8NEB7 543 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 STYXQ8WUJ0 223 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 MRFAP1L1Q96HT8 127 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 SLC25A23Q9BV35 468 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 XKR8Q9H6D3 395 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 ACTR5Q9H9F9 607 aaPredicted RBP17.9■□□□□ 0.46
CLN6-220ENST00000637450 AMFRQ9UKV5 643 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms