RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CDKN1CP49918 316 aaPredicted RBP17.44■□□□□ 0.38
PNKP-225ENST00000636214 KPNA2P52292 529 aaKnown RBP17.44■□□□□ 0.38
PNKP-225ENST00000636214 RPS15P62841 145 aaKnown RBP17.44■□□□□ 0.38
PNKP-225ENST00000636214 ATP1A1-AS1Q5TC04 95 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 PTRH1Q86Y79 214 aaKnown RBP17.44■□□□□ 0.38
PNKP-225ENST00000636214 CCDC89Q8N998 374 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 CT55Q8WUE5 264 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 ATG4AQ8WYN0 398 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 C1GALT1Q9NS00 363 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 KCND1Q9NSA2 647 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 POMT2Q9UKY4 750 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 IGLV3-16A0A075B6K0 115 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 HEATR9A2RTY3 570 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 LIN7AO14910 233 aaPredicted RBP17.43■□□□□ 0.38
PNKP-225ENST00000636214 KDM1AO60341 852 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 CREG1O75629 220 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 TIAF1O95411 115 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 KLK3P07288 261 aaPredicted RBP17.43■□□□□ 0.38
PNKP-225ENST00000636214 SPTBP11277 2137 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 F8A1P23610 371 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 PPARGP37231 505 aaPredicted RBP17.43■□□□□ 0.38
PNKP-225ENST00000636214 PREPP48147 710 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 CSRP3P50461 194 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 GSDMDP57764 484 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 ITIH4Q14624 930 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 GPR19Q15760 415 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 DBN1Q16643 649 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 LACTB2Q53H82 288 aaPredicted RBP17.43■□□□□ 0.38
PNKP-225ENST00000636214 OR52K1Q8NGK4 314 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 HGH1Q9BTY7 390 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 GPR87Q9BY21 358 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 SLC7A5P2Q9GIP4 190 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 OR52A5Q9H2C5 316 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 ZNF71Q9NQZ8 489 aaPredicted RBP17.43■□□□□ 0.38
PNKP-225ENST00000636214 BTRCQ9Y297 605 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 MAN2B2Q9Y2E5 1009 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 PCDHGA6Q9Y5G7 932 aa17.43■□□□□ 0.38
PNKP-225ENST00000636214 SEC16AO15027 2179 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 ASH1LQ9NR48 2969 aaKnown RBP17.42■□□□□ 0.38
PNKP-225ENST00000636214 NBASA2RRP1 2371 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 A0A0U1RQJ8 604 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 TCRBV7S2A1N4TA0A589 114 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 C2orf74A8MZ97 194 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 MKRN2OSH3BPM6 223 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 LIASO43766 372 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 OR56A5P0C7T3 313 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 PLOD1Q02809 727 aaPredicted RBP17.42■□□□□ 0.38
PNKP-225ENST00000636214 CCDC38Q502W7 563 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 LYPLAL1Q5VWZ2 237 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 AFTPHQ6ULP2 937 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 CERS6Q6ZMG9 384 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 AMIGO1Q86WK6 493 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 CLDN19Q8N6F1 224 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 ELMO1Q92556 727 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 TFGQ92734 400 aaPredicted RBP17.42■□□□□ 0.38
PNKP-225ENST00000636214 N4BP2L2Q92802 583 aaPredicted RBP17.42■□□□□ 0.38
PNKP-225ENST00000636214 MR1Q95460 341 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 TSSK1BQ9BXA7 367 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 TLR10Q9BXR5 811 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 SYTL2Q9HCH5 934 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 ASF1AQ9Y294 204 aa17.42■□□□□ 0.38
PNKP-225ENST00000636214 SETXQ7Z333 2677 aaKnown RBP17.42■□□□□ 0.38
PNKP-225ENST00000636214 MROH6A6NGR9 719 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 SLC9B1P1A6NJY1 282 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 TMEM150CB9EJG8 249 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 RFPL1O75677 317 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 RECKO95980 971 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 PRSS56P0CW18 603 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 CYP2A7P20853 494 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 PDHA2P29803 388 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 PRKG2Q13237 762 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 BOP1Q14137 746 aaKnown RBP17.41■□□□□ 0.38
PNKP-225ENST00000636214 RPS6KA1Q15418 735 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 FBXO38Q6PIJ6 1188 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 PACS1Q6VY07 963 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 NLRP9Q7RTR0 991 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 SLC13A5Q86YT5 568 aaPredicted RBP17.41■□□□□ 0.38
PNKP-225ENST00000636214 PIANPQ8IYJ0 282 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 PHC3Q8NDX5 983 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 OR52E1Q8NGJ3 308 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 CPT1BQ92523 772 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 ABHD17AQ96GS6 310 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 ACTL8Q9H568 366 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 TFB2MQ9H5Q4 396 aaKnown RBP17.41■□□□□ 0.38
PNKP-225ENST00000636214 ETNK1Q9HBU6 452 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 LATS2Q9NRM7 1088 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 ANAPC2Q9UJX6 822 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 KCNMB2Q9Y691 235 aa17.41■□□□□ 0.38
PNKP-225ENST00000636214 BTN3A1O00481 513 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 TERTO14746 1132 aaKnown RBP17.4■□□□□ 0.38
PNKP-225ENST00000636214 PTPN4P29074 926 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 PRAMEP78395 509 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 TLE1Q04724 770 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 SNX1Q13596 522 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 BRD3Q15059 726 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 OASLQ15646 514 aaKnown RBP17.4■□□□□ 0.38
PNKP-225ENST00000636214 PPHLN1Q8NEY8 458 aaKnown RBP17.4■□□□□ 0.38
PNKP-225ENST00000636214 OR6P1Q8NGX9 317 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 C1orf54Q8WWF1 131 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 ZNF501Q96CX3 271 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms