RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF571Q7Z3V5 609 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 POLNQ7Z5Q5 900 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ACDQ96AP0 544 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 SLC35G5Q96KT7 338 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 HEPHQ9BQS7 1158 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 NPLQ9BXD5 320 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 NMUR1Q9HB89 426 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 TRIM36Q9NQ86 728 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 SLC2A4RGQ9NR83 387 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PDP1Q9P0J1 537 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 RAI2Q9Y5P3 530 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 MYH8P13535 1937 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ATP6AP2A0A1C7CYW4 349 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PRORSD1PA6NEY8 169 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ACTL6BO94805 426 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 HEXBP07686 556 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 COX4I1P13073 169 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ATF6P18850 670 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 IGFBP5P24593 272 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 RBMS1P29558 406 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PRMT2P55345 433 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 GPM6BQ13491 265 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 LRP8Q14114 963 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF782Q6ZMW2 699 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 OTOP1Q7RTM1 612 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 FBXW8Q8N3Y1 598 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 IL22RA1Q8N6P7 574 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 KCT2Q8NC54 265 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 CAMKVQ8NCB2 501 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 OR5T2Q8NGG2 359 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PNPT1Q8TCS8 783 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 DIRAS2Q96HU8 199 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 TUBGCP5Q96RT8 1024 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 AGO3Q9H9G7 860 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 THUMPD1Q9NXG2 353 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ALKQ9UM73 1620 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 RBM47A0AV96 593 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 PI15O43692 258 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ANXA4P09525 319 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TSPAN8P19075 237 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 RGS19P49795 217 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 POLR2JP52435 117 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CORO7P57737 925 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FKBP1AP62942 108 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CRADDP78560 199 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 MRPS5P82675 430 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SLC10A7Q0GE19 358 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 BNIP3Q12983 259 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 C15orf59Q2T9L4 293 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 OGFRL1Q5TC84 451 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 RAD9BQ6WBX8 426 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 UTS2BQ765I0 119 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 KIAA0319LQ8IZA0 1049 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 HNRNPLLQ8WVV9 542 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 MKL1Q969V6 931 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 RADILQ96JH8 1075 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TRMOQ9BU70 441 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 NUSAP1Q9BXS6 441 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CLK4Q9HAZ1 481 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CENPMQ9NSP4 180 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 PNPLA3Q9NST1 481 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF226Q9NYT6 803 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 MLXQ9UH92 298 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 VWA7Q9Y334 891 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CNTNAP1P78357 1384 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SPATA31E1Q6ZUB1 1445 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SMIM35A0A1B0GVV1 85 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 OR2AG2A6NM03 316 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TFECO14948 347 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CYB5BO43169 146 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 PCDHGA12O60330 932 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FADS2O95864 444 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 AQP1P29972 269 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 UGT1A3P35503 534 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 GLP1RP43220 463 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CYP4F8P98187 520 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 KCTD21Q4G0X4 260 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 SLC2A7Q6PXP3 512 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 GALNT5Q7Z7M9 940 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CMTR2Q8IYT2 770 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FTMTQ8N4E7 242 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FAM46DQ8NEK8 389 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF347Q96SE7 839 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 BCO2Q9BYV7 579 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 RAB9BQ9NP90 201 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 REREQ9P2R6 1566 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 C2orf71A6NGG8 1288 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CA12O43570 354 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 STK16O75716 305 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 IFNA2P01563 188 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CYP1A2P05177 515 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 GJB1P08034 283 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TIE1P35590 1138 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 DGKGP49619 791 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CTBP2P56545 445 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF844Q08AG5 666 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FIGNQ5HY92 759 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 FKBP1CQ5VVH2 108 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms