RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 L3MBTL4Q8NA19 623 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 SLC4A11Q8NBS3 891 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 KCNH5Q8NCM2 988 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 MARK4Q96L34 752 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 MUS81Q96NY9 551 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 IL17FQ96PD4 163 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 TUBA1CQ9BQE3 449 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 ADPGKQ9BRR6 497 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 BTBD10Q9BSF8 475 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 LMF2Q9BU23 707 aaKnown RBP3.89□□□□□ -1.79
CDR1-202ENST00000625883 C1QTNF4Q9BXJ3 329 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 Q9N2K0 584 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 MYNNQ9NPC7 610 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 DPP3Q9NY33 737 aa3.89□□□□□ -1.79
CDR1-202ENST00000625883 ASPDHA6ND91 283 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 PRAC2D3DTV9 90 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 MEIS2O14770 477 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 PDE9AO76083 593 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 ATP5BP06576 529 aaKnown RBP3.88□□□□□ -1.79
CDR1-202ENST00000625883 SNHG28P0DPA3 235 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 HOXC8P31273 242 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 LIMK1P53667 647 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 MLLT10P55197 1068 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 IRAK1BP1Q5VVH5 260 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 PRR27Q6MZM9 219 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 LINGO4Q6UY18 593 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 ZNF517Q6ZMY9 492 aaPredicted RBP3.88□□□□□ -1.79
CDR1-202ENST00000625883 ZBTB49Q6ZSB9 765 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 DSG4Q86SJ6 1040 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 TTC30BQ8N4P2 665 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 CPSF7Q8N684 471 aaKnown RBP3.88□□□□□ -1.79
CDR1-202ENST00000625883 LMO3Q8TAP4 145 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 ATL1Q8WXF7 558 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 ABHD8Q96I13 439 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 SPATA17Q96L03 361 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 ZNF558Q96NG5 402 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 RAB3IPQ96QF0 476 aaPredicted RBP3.88□□□□□ -1.79
CDR1-202ENST00000625883 SEPHS2Q99611 448 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 POLR3CQ9BUI4 534 aaPredicted RBP3.88□□□□□ -1.79
CDR1-202ENST00000625883 C6orf106Q9H6K1 298 aaPredicted RBP3.88□□□□□ -1.79
CDR1-202ENST00000625883 ACKR4Q9NPB9 350 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 POU2F3Q9UKI9 436 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 RNF150Q9ULK6 438 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 ABT1Q9ULW3 272 aaKnown RBP3.88□□□□□ -1.79
CDR1-202ENST00000625883 PADI2Q9Y2J8 665 aa3.88□□□□□ -1.79
CDR1-202ENST00000625883 SOS1Q07889 1333 aaPredicted RBP3.88□□□□□ -1.79
CDR1-202ENST00000625883 PLSCR5A0PG75 271 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 HYKKA2RU49 373 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 BAG4O95429 457 aaKnown RBP3.87□□□□□ -1.79
CDR1-202ENST00000625883 WDPCPO95876 746 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 RPN1P04843 607 aaKnown RBP3.87□□□□□ -1.79
CDR1-202ENST00000625883 H1F0P07305 194 aaKnown RBP3.87□□□□□ -1.79
CDR1-202ENST00000625883 T-ENOLP0DO92 83 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 CKMT2P17540 419 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 AZGP1P25311 298 aaKnown RBP3.87□□□□□ -1.79
CDR1-202ENST00000625883 HSPA4P34932 840 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 SLC9A3P48764 834 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 ZNF132P52740 706 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 THOP1P52888 689 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 RBP5P82980 135 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 MBTD1Q05BQ5 628 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 ILF3Q12906 894 aaKnown RBP eCLIP3.87□□□□□ -1.79
CDR1-202ENST00000625883 FHL1Q13642 323 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 ZNF324BQ6AW86 544 aaPredicted RBP3.87□□□□□ -1.79
CDR1-202ENST00000625883 TMPRSS11BQ86T26 416 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 SLC9B2Q86UD5 537 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 LONP2Q86WA8 852 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 CCAR2Q8N163 923 aaKnown RBP3.87□□□□□ -1.79
CDR1-202ENST00000625883 RDM1Q8NG50 284 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 SPATA20Q8TB22 786 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 SECTM1Q8WVN6 248 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 ROBO4Q8WZ75 1007 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 SPSB1Q96BD6 273 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 IGSF21Q96ID5 467 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 THOC3Q96J01 351 aaKnown RBP3.87□□□□□ -1.79
CDR1-202ENST00000625883 C17orf77Q96MU5 243 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 SFXN2Q96NB2 322 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 VN1R1Q9GZP7 353 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 FZD8Q9H461 694 aa3.87□□□□□ -1.79
CDR1-202ENST00000625883 TRIP12Q14669 1992 aaPredicted RBP3.87□□□□□ -1.79
CDR1-202ENST00000625883 MED19A0JLT2 244 aaPredicted RBP3.86□□□□□ -1.79
CDR1-202ENST00000625883 CLIC2O15247 247 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 SYNCRIPO60506 623 aaKnown RBP3.86□□□□□ -1.79
CDR1-202ENST00000625883 PRKCZQ05513 592 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 EEF1A2Q05639 463 aaKnown RBP3.86□□□□□ -1.79
CDR1-202ENST00000625883 MZT1Q08AG7 82 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 COASYQ13057 564 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 MFAP5Q13361 173 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 DUOXA1Q1HG43 343 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 ZNF585BQ52M93 769 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 MDH1BQ5I0G3 518 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 SIRPB2Q5JXA9 342 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 CAVIN1Q6NZI2 390 aaKnown RBP3.86□□□□□ -1.79
CDR1-202ENST00000625883 DET1Q7L5Y6 550 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 METTL23Q86XA0 190 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 MFN1Q8IWA4 741 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 NAGSQ8N159 534 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 ARHGAP24Q8N264 748 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 IQUBQ8NA54 791 aa3.86□□□□□ -1.79
CDR1-202ENST00000625883 KBTBD3Q8NAB2 608 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms