RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 C17orf62Q9BQA9 187 aa14.04□□□□□ -0.16
SNX12-206ENST00000622259 PCDH9Q9HC56 1237 aa14.04□□□□□ -0.16
SNX12-206ENST00000622259 MEMO1Q9Y316 297 aa14.04□□□□□ -0.16
SNX12-206ENST00000622259 HS3ST3B1Q9Y662 390 aa14.04□□□□□ -0.16
SNX12-206ENST00000622259 ATRQ13535 2644 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 AMPD1P23109 780 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 PMP22Q01453 160 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 RBPJQ06330 500 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 NIPAL4Q0D2K0 466 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 CEBPEQ15744 281 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 DEFB110Q30KQ9 67 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 NKAIN1Q4KMZ8 207 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 IRAK1BP1Q5VVH5 260 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 MON1BQ7L1V2 547 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 TMEM200AQ86VY9 491 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 PHF13Q86YI8 300 aaPredicted RBP14.03□□□□□ -0.16
SNX12-206ENST00000622259 ATPAF2Q8N5M1 289 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 OR4E2Q8NGC2 313 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 CCHCR1Q8TD31 782 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 ZNF653Q96CK0 615 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 ZSCAN5AQ9BUG6 496 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 LIME1Q9H400 295 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 FAM60AQ9NP50 221 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 SAMSN1Q9NSI8 373 aaKnown RBP14.03□□□□□ -0.16
SNX12-206ENST00000622259 IFNKQ9P0W0 207 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 LIMA1Q9UHB6 759 aaKnown RBP14.03□□□□□ -0.16
SNX12-206ENST00000622259 CDC23Q9UJX2 597 aa14.03□□□□□ -0.16
SNX12-206ENST00000622259 ANK3Q12955 4377 aaKnown RBP14.02□□□□□ -0.16
SNX12-206ENST00000622259 TRAV17A0A0B4J275 112 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 LRRC10BA6NIK2 292 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 EIF3CLB5ME19 914 aaKnown RBP14.02□□□□□ -0.17
SNX12-206ENST00000622259 ZNHIT1O43257 154 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 POP7O75817 140 aaKnown RBP14.02□□□□□ -0.17
SNX12-206ENST00000622259 UCHL3P15374 230 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 VCLP18206 1134 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 HLA-DPA1P20036 260 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 PRDX3P30048 256 aaKnown RBP14.02□□□□□ -0.17
SNX12-206ENST00000622259 MTIF2P46199 727 aaKnown RBP14.02□□□□□ -0.17
SNX12-206ENST00000622259 NSFP46459 744 aaKnown RBP14.02□□□□□ -0.17
SNX12-206ENST00000622259 CTSCP53634 463 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 CASP6P55212 293 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 CDH6P55285 790 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 DMPKQ09013 629 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 TMEM115Q12893 351 aaPredicted RBP14.02□□□□□ -0.17
SNX12-206ENST00000622259 XRCC4Q13426 336 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 TCP11X2Q5H9J9 407 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 ALG1LQ6GMV1 187 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 FAM20CQ8IXL6 584 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
SNX12-206ENST00000622259 ARRDC2Q8TBH0 407 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 NSMCE1Q8WV22 266 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 ARSGQ96EG1 525 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 EIF3CQ99613 913 aaKnown RBP14.02□□□□□ -0.17
SNX12-206ENST00000622259 AP1M1Q9BXS5 423 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 STK33Q9BYT3 514 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 PITPNM3Q9BZ71 974 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 POLR1EQ9GZS1 481 aaKnown RBP14.02□□□□□ -0.17
SNX12-206ENST00000622259 HSD3B7Q9H2F3 369 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 KIR3DX1Q9H7L2 352 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 SHOC2Q9UQ13 582 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 ZNF835Q9Y2P0 537 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 HCFC1P51610 2035 aa14.02□□□□□ -0.17
SNX12-206ENST00000622259 GSAPA4D1B5 854 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 RASAL1O95294 804 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 SLC4A1P02730 911 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 CALB1P05937 261 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 PIRTP0C851 137 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 ATP1A3P13637 1013 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 ITGAXP20702 1163 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 GABRA4P48169 554 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 HCAR3P49019 387 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 DCDC1P59894 354 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 ADAM8P78325 824 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 TMPRSS15P98073 1019 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 CLEC16AQ2KHT3 1053 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 SHISA6Q6ZSJ9 500 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 AMZ2Q86W34 360 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 PROKR1Q8TCW9 393 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 C12orf66Q96MD2 445 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 XPO4Q9C0E2 1151 aaKnown RBP14.01□□□□□ -0.17
SNX12-206ENST00000622259 WWP1Q9H0M0 922 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 GPAMQ9HCL2 828 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 NPDC1Q9NQX5 325 aaPredicted RBP14.01□□□□□ -0.17
SNX12-206ENST00000622259 IMPACTQ9P2X3 320 aa14.01□□□□□ -0.17
SNX12-206ENST00000622259 GTF3C1Q12789 2109 aa14□□□□□ -0.17
SNX12-206ENST00000622259 ANKRD66B4E2M5 251 aa14□□□□□ -0.17
SNX12-206ENST00000622259 BTN3A3O00478 584 aa14□□□□□ -0.17
SNX12-206ENST00000622259 OR2B3O76000 313 aa14□□□□□ -0.17
SNX12-206ENST00000622259 SLCO2B1O94956 709 aa14□□□□□ -0.17
SNX12-206ENST00000622259 CD63P08962 238 aa14□□□□□ -0.17
SNX12-206ENST00000622259 SOX11P35716 441 aa14□□□□□ -0.17
SNX12-206ENST00000622259 RPL26P61254 145 aaKnown RBP14□□□□□ -0.17
SNX12-206ENST00000622259 PRKAA1Q13131 559 aa14□□□□□ -0.17
SNX12-206ENST00000622259 ZIC1Q15915 447 aa14□□□□□ -0.17
SNX12-206ENST00000622259 TUBB8Q3ZCM7 444 aa14□□□□□ -0.17
SNX12-206ENST00000622259 ATP13A5Q4VNC0 1218 aa14□□□□□ -0.17
SNX12-206ENST00000622259 PDPK2PQ6A1A2 396 aa14□□□□□ -0.17
SNX12-206ENST00000622259 Q6ZPB1 254 aaPredicted RBP14□□□□□ -0.17
SNX12-206ENST00000622259 BIVMQ86UB2 503 aa14□□□□□ -0.17
SNX12-206ENST00000622259 GPR135Q8IZ08 494 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms