RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 THAP10Q9P2Z0 257 aaPredicted RBP18.65■□□□□ 0.58
PSPC1-206ENST00000619300 PSMC3P17980 439 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 HTR6P50406 440 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 ATP6AP1LQ52LC2 224 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 DSG4Q86SJ6 1040 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 SFRP1Q8N474 314 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 PCYOX1LQ8NBM8 494 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 ANKRD27Q96NW4 1050 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 SLC32A1Q9H598 525 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 DYRK4Q9NR20 520 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 COQ6Q9Y2Z9 468 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 NDUFAF1Q9Y375 327 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 LRRC42Q9Y546 428 aa18.64■□□□□ 0.58
PSPC1-206ENST00000619300 PLXNA2O75051 1894 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 PLK4O00444 970 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 NR5A2O00482 541 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 SYNCRIPO60506 623 aaKnown RBP18.64■□□□□ 0.57
PSPC1-206ENST00000619300 RECQL5O94762 991 aaPredicted RBP18.64■□□□□ 0.57
PSPC1-206ENST00000619300 KAT7O95251 611 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 EBLN1P0CF75 366 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 XRCC1P18887 633 aaPredicted RBP18.64■□□□□ 0.57
PSPC1-206ENST00000619300 CYP2A7P20853 494 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 VHLP40337 213 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 EIF2DP41214 584 aaKnown RBP18.64■□□□□ 0.57
PSPC1-206ENST00000619300 PSMD8P48556 350 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 HNMTP50135 292 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 CTSCP53634 463 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 ABRAXAS2Q15018 415 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 BLOC1S3Q6QNY0 202 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 LRRC74BQ6ZQY2 392 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 MMAAQ8IVH4 418 aaKnown RBP18.64■□□□□ 0.57
PSPC1-206ENST00000619300 MCOLN3Q8TDD5 553 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 PYDC1Q8WXC3 89 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 BRINP2Q9C0B6 783 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 ADA2Q9NZK5 511 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 CROTQ9UKG9 612 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 HCN2Q9UL51 889 aa18.64■□□□□ 0.57
PSPC1-206ENST00000619300 CNOT6Q9ULM6 557 aaKnown RBP18.64■□□□□ 0.57
PSPC1-206ENST00000619300 PABPN1LA6NDY0 278 aaKnown RBP18.63■□□□□ 0.57
PSPC1-206ENST00000619300 LOC730098B7Z3J9 87 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 E7ENX8 843 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 INPP4BO15327 924 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 TSPAN6O43657 245 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 ATG13O75143 517 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 GTF2A1P52655 376 aaPredicted RBP18.63■□□□□ 0.57
PSPC1-206ENST00000619300 VPS26BQ4G0F5 336 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 ERN2Q76MJ5 926 aaKnown RBP18.63■□□□□ 0.57
PSPC1-206ENST00000619300 ZNF765Q7L2R6 523 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 KBTBD6Q86V97 674 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 HOMEZQ8IX15 550 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 RNF148Q8N7C7 305 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 FNDC5Q8NAU1 212 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 HIPK4Q8NE63 616 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 TSPEARQ8WU66 669 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 ROPN1LQ96C74 230 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 P2RY13Q9BPV8 354 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 KXD1Q9BQD3 176 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 CCM2Q9BSQ5 444 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 MRPL40Q9NQ50 206 aaKnown RBP18.63■□□□□ 0.57
PSPC1-206ENST00000619300 PRSS16Q9NQE7 514 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 TRPS1Q9UHF7 1281 aa18.63■□□□□ 0.57
PSPC1-206ENST00000619300 ANTXRLA6NF34 631 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 TMEM202A6NGA9 273 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 MMP20O60882 483 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 BAG2O95816 211 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 EPHX1P07099 455 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 C6P13671 934 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 CAPN3P20807 821 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 GRIA2P42262 883 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 PRLHRP49683 370 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 AP1S2P56377 157 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 ZXDCQ2QGD7 858 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-206ENST00000619300 TMEM52BQ4KMG9 183 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 PDCD4Q53EL6 469 aaKnown RBP18.62■□□□□ 0.57
PSPC1-206ENST00000619300 C8orf82Q6P1X6 216 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-206ENST00000619300 TMEM220Q6QAJ8 160 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 LAYNQ6UX15 382 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 LRRC70Q7Z2Q7 622 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 RETREG3Q86VR2 466 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 NLRP8Q86W28 1048 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 RASGRP3Q8IV61 690 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 ELSPBP1Q96BH3 223 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 NUS1Q96E22 293 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 CHFRQ96EP1 664 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 C1orf50Q9BV19 199 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 EPHX3Q9H6B9 360 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 BCAP29Q9UHQ4 241 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 RNF11Q9Y3C5 154 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 C1QTNF3-AMACRE9PGA6 284 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 TRIM38O00635 465 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 LSM1O15116 133 aaKnown RBP18.62■□□□□ 0.57
PSPC1-206ENST00000619300 ANGPT2O15123 496 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 LZTS3O60299 673 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-206ENST00000619300 SLC22A3O75751 556 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 SOD1P00441 154 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 LAMP2P13473 410 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 MSX2P35548 267 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-206ENST00000619300 MS4A2Q01362 244 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 EMX2Q04743 252 aa18.62■□□□□ 0.57
PSPC1-206ENST00000619300 PARM1Q6UWI2 310 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms