RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 COPS8Q99627 209 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 GPR21Q99679 349 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 C3orf14Q9HBI5 128 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 PAK1IP1Q9NWT1 392 aaPredicted RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 UBQLN2Q9UHD9 624 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 GRXCR2A6NFK2 248 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 SLC28A2O43868 658 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 OR4F21O95013 312 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 SNX4O95219 450 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TLX1P31314 330 aaPredicted RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 MAGEA2P43356 314 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 PPP3R1P63098 170 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 CNTN2Q02246 1040 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 IL10RBQ08334 325 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 BAIAP2L2Q6UXY1 529 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 CATSPERGQ6ZRH7 1159 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 UBE2R2Q712K3 238 aaPredicted RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TRMT11Q7Z4G4 463 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 PLEKHH3Q7Z736 793 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 KLHL36Q8N4N3 616 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 SEZ6LQ9BYH1 1024 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 IKZF4Q9H2S9 585 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 SYNDIG1Q9H7V2 258 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 POLR3BQ9NW08 1133 aaPredicted RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 COL20A1Q9P218 1284 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 LRG1P02750 347 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 IL1R2P27930 398 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 GRM2Q14416 872 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 TAF1AQ15573 450 aaPredicted RBP10.1□□□□□ -0.79
CUL4A-212ENST00000617546 ATG9BQ674R7 924 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 PLCZ1Q86YW0 608 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 C12orf29Q8N999 325 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 C1orf127Q8N9H9 656 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 MFSD2AQ8NA29 543 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 SLC37A3Q8NCC5 494 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 IL31RAQ8NI17 732 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
CUL4A-212ENST00000617546 TRNT1Q96Q11 434 aaKnown RBP10.1□□□□□ -0.79
CUL4A-212ENST00000617546 MTFR1LQ9H019 292 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 ATPIF1Q9UII2 106 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 PLCL2Q9UPR0 1127 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF536O15090 1300 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 CYP7B1O75881 506 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 CHRNA5P30532 468 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 RFC2P35250 354 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 YAP1P46937 504 aaKnown RBP10.1□□□□□ -0.79
CUL4A-212ENST00000617546 ATN1P54259 1190 aaPredicted RBP10.1□□□□□ -0.79
CUL4A-212ENST00000617546 CDH12P55289 794 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 SWI5Q1ZZU3 235 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 PITRM1Q5JRX3 1037 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 GPALPP1Q8IXQ4 340 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 LMO3Q8TAP4 145 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 PIGXQ8TBF5 258 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 TRPM4Q8TD43 1214 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 GEMIN6Q8WXD5 167 aaKnown RBP10.1□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF486Q96H40 463 aaPredicted RBP10.1□□□□□ -0.79
CUL4A-212ENST00000617546 TSSK3Q96PN8 268 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 ANKMY1Q9P2S6 941 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 EBF1Q9UH73 591 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF451Q9Y4E5 1061 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 MT-ND1P03886 318 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 MTPNP58546 118 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 FAM174BQ3ZCQ3 159 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF311Q5JNZ3 666 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 CHPFQ8IZ52 775 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 GAB3Q8WWW8 586 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 SLC4A9Q96Q91 983 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 DHRS4Q9BTZ2 278 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 MOCS1Q9NZB8 636 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 NPAP1Q9NZP6 1156 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 SEC14L3Q9UDX4 400 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 CASTOR2A6NHX0 329 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 COQ9O75208 318 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 OR5F1O95221 314 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 OR6A2O95222 327 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 GPAT3Q53EU6 434 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 TMEM17Q86X19 198 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 KIF18BQ86Y91 864 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 UTP4Q969X6 686 aaKnown RBP10.1□□□□□ -0.79
CUL4A-212ENST00000617546 PPP1R16AQ96I34 528 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 TMEM246Q9BRR3 403 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 ACTR6Q9GZN1 396 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 PEAK1Q9H792 1746 aa10.1□□□□□ -0.79
CUL4A-212ENST00000617546 HLA-DPB1P04440 258 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 PBLDP30039 288 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MNDAP41218 407 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CD83Q01151 205 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 GK3PQ14409 553 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MFSD10Q14728 455 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 TCEA2Q15560 299 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MEDAGQ5VYS4 303 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 EEF1DP3Q658K8 133 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 RAP1GAP2Q684P5 730 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 APOLD1Q96LR9 279 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF599Q96NL3 588 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 GFM1Q96RP9 751 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF717Q9BY31 904 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 OXCT2Q9BYC2 517 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 GPR88Q9GZN0 384 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 TMPRSS4Q9NRS4 437 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms