RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 VAMP3Q15836 100 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 LINC00116Q8NCU8 138 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 ASPNQ9BXN1 380 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 SNTG1Q9NSN8 517 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 C2orf78A6NCI8 922 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 CDC7O00311 574 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 EEF2KO00418 725 aaKnown RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 ETFBP38117 255 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 LARS2Q15031 903 aaKnown RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 GPAT2Q6NUI2 795 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 TMEM192Q8IY95 271 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 FAM71AQ8IYT1 594 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 TNFRSF25Q93038 417 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 PIWIL1Q96J94 861 aaKnown RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 SCN1AP35498 2009 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 MTA2O94776 668 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 PPM1AP35813 382 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 GNASQ5JWF2 1037 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 OTOP1Q7RTM1 612 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 P4HA3Q7Z4N8 544 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 JAZF1Q86VZ6 243 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 URGCPQ8TCY9 931 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 TRAPPC12Q8WVT3 735 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 CCDC3Q9BQI4 270 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 MEAF6Q9HAF1 191 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 NMRK2Q9NPI5 230 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 F5H0A9 414 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 SMARCB1Q12824 385 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 FRRS1Q6ZNA5 592 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 CPA5Q8WXQ8 436 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 KCTD7Q96MP8 289 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 OR11A1Q9GZK7 315 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 MYNNQ9NPC7 610 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 PRDM9Q9NQV7 894 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 BCS1LQ9Y276 419 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 DUSP10Q9Y6W6 482 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 NKRFO15226 690 aaKnown RBP eCLIP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 SLC25A12O75746 678 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 CHRNB2P17787 502 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 ITPKAP23677 461 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 HALP42357 657 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 CLK2P49760 499 aaKnown RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 BCAT1P54687 386 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 HTD2P86397 168 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 HLA-DQA1Q5Y7H0 255 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 PAOXQ6QHF9 649 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 DNAJB7Q7Z6W7 309 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 PCDHGB2Q9Y5G2 931 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF20P17024 532 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 MAPK3P27361 379 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 PTP4A2Q12974 167 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 PEA15Q15121 130 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 AP5B1Q2VPB7 878 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 METTL21CQ5VZV1 264 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 NOTUMQ6P988 496 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 INPP4AQ96PE3 977 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 ADAM28Q9UKQ2 775 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 BBIP1A8MTZ0 92 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 DIRAS1O95057 198 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 SRSF11Q05519 484 aaKnown RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 DNASE1L3Q13609 305 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 CDK10Q15131 360 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 KCNIP4Q6PIL6 250 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 DPCDQ9BVM2 203 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-211ENST00000615798 CIPCQ9C0C6 399 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 CHST12Q9NRB3 414 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 MYPNQ86TC9 1320 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 NPHP3-ACAD11A0A0J9YXS1 232 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 NRP2O60462 931 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 PROS1P07225 676 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 RAB8AP61006 207 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 GTF2BQ00403 316 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 MFSD10Q14728 455 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 KCTD19Q17RG1 926 aaPredicted RBP9.15□□□□□ -0.95
COL12A1-211ENST00000615798 TMEM44Q2T9K0 475 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 TPRG1LQ5T0D9 272 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 RNF148Q8N7C7 305 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 FBXO36Q8NEA4 188 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 CBWD1Q9BRT8 395 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 C13orf42A0A1B0GVH6 325 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 NUDT14O95848 222 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 IFNA5P01569 189 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 CYP1A2P05177 515 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 IDO1P14902 403 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 TLE1Q04724 770 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 DEDD2Q8WXF8 326 aa9.15□□□□□ -0.95
COL12A1-211ENST00000615798 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 RXRBP28702 533 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 MERTKQ12866 999 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 MTM1Q13496 603 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 FASTKD3Q14CZ7 662 aaKnown RBP9.14□□□□□ -0.95
COL12A1-211ENST00000615798 C12orf65Q9H3J6 166 aaKnown RBP9.14□□□□□ -0.95
COL12A1-211ENST00000615798 CHD3Q12873 2000 aaKnown RBP9.14□□□□□ -0.95
COL12A1-211ENST00000615798 CD72P21854 359 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 KLF10Q13118 480 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 LRP8Q14114 963 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 STK11Q15831 433 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 C1orf216Q8TAB5 229 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 DNAJB3Q8WWF6 145 aa9.14□□□□□ -0.95
COL12A1-211ENST00000615798 DUSP22Q9NRW4 184 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms