RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SCAMP4Q969E2 229 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 GFM2Q969S9 779 aaKnown RBP13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ERLEC1Q96DZ1 483 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ASIC4Q96FT7 647 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 OPTCQ9UBM4 332 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 TMPRSS11EQ9UL52 423 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZNF490Q9ULM2 529 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 HCFC2Q9Y5Z7 792 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 KANSL1LA0AUZ9 987 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 LEFTY2O00292 366 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 SNAP29O95721 258 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 GSNP06396 782 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 CCL5P13501 91 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 WEE1P30291 646 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 SPAM1P38567 509 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZNF783Q6ZMS7 281 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 TMC8Q8IU68 726 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 RGL4Q8IZJ4 473 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZNF366Q8N895 744 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 TRPV3Q8NET8 790 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 OR2AP1Q8NGE2 309 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 NCSTNQ92542 709 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 MRPS31Q92665 395 aaKnown RBP13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ISG20Q96AZ6 181 aaKnown RBP13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZNF689Q96CS4 500 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 SH3GL3Q99963 347 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ADI1Q9BV57 179 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 CD244Q9BZW8 370 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ATP13A3Q9H7F0 1226 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 PAK6Q9NQU5 681 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 TMEM39AQ9NV64 488 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 SPG21Q9NZD8 308 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZIM2Q9NZV7 527 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 OARD1Q9Y530 152 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 REV3LO60673 3130 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 HNRNPRO43390 633 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 SH3BGRLO75368 114 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 OTCP00480 354 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 EPORP19235 508 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 NFKBIAP25963 317 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 EMX2Q04743 252 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 BOP1Q14137 746 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 SF1Q15637 639 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 CERS6Q6ZMG9 384 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 HS3ST5Q8IZT8 346 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 TRIML2Q8N7C3 387 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 NAT16Q8N8M0 369 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 OR10A6Q8NH74 314 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 FIG4Q92562 907 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 PDLIM5Q96HC4 596 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 HERC2P3Q9BVR0 1158 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 CHID1Q9BWS9 393 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 RETREG1Q9H6L5 497 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 ANAPC2Q9UJX6 822 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 LSM7Q9UK45 103 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 SZT2Q5T011 3432 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 ANKRD33BA6NCL7 494 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 H3BNH8 94 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 SEC22BO75396 215 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 RFPL2O75678 378 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 LRATO95237 230 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 H6PDO95479 791 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 IGSF6O95976 241 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 TCF3P15923 654 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 CD9P21926 228 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 DGKAP23743 735 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 RGS4P49798 205 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 NKG7Q16617 165 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 ENPP6Q6UWR7 440 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 HID1Q8IV36 788 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 FBXO30Q8TB52 745 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 DGCR14Q96DF8 476 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 CGREF1Q99674 301 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 TRIM15Q9C019 465 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 LINC00597Q9H2U6 94 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 HEBP1Q9NRV9 189 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 ETAA1Q9NY74 926 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 DLGAP4Q9Y2H0 992 aa13.8□□□□□ -0.2
PCDHGA3-202ENST00000612467 TRBV5-4A0A0C4DH59 114 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 SMIM31A0A1B0GVY4 71 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 NEDD8-MDP1E9PL57 170 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 TMX2-CTNND1H3BSU7 103 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 AREL1O15033 823 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 GLUD1P00367 558 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZNF23P17027 643 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 VARSP26640 1264 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 SERPINA4P29622 427 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 RFC2P35250 354 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 LSAMPQ13449 338 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 KIAA0040Q15053 153 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 ATP6AP1Q15904 470 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 CRY1Q16526 586 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 CNKSR3Q6P9H4 555 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 RMND5BQ96G75 393 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 CENPNQ96H22 339 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 CEP295NLQ96MC4 621 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 LRRC3Q9BY71 257 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 ANKRD60Q9BZ19 345 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 ARL15Q9NXU5 204 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 SLC25A37Q9NYZ2 338 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms