RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 NAGLUP54802 743 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 STX3Q13277 289 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 SP140Q13342 867 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 FZD2Q14332 565 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 FAM47EQ6ZV65 393 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 RAB44Q7Z6P3 723 aaPredicted RBP17.15■□□□□ 0.34
SREK1-216ENST00000612404 DCP2Q8IU60 420 aaKnown RBP17.15■□□□□ 0.34
SREK1-216ENST00000612404 RAB3IL1Q8TBN0 382 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 DNASE2BQ8WZ79 361 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 MOCOSQ96EN8 888 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 EGFL8Q99944 293 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 SLC12A9Q9BXP2 914 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 TMEM168Q9H0V1 697 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 OR52A5Q9H2C5 316 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 PARVBQ9HBI1 364 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 GPR27Q9NS67 375 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 NUDT4Q9NZJ9 180 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 PDE10AQ9Y233 779 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 SPAG17Q6Q759 2223 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 A0A1W2PR77 199 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 GFYI3L273 518 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 KCNJ13O60928 360 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 TNFP01375 233 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 SERPINE1P05121 402 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 HIST1H2AGP0C0S8 130 aaPredicted RBP17.14■□□□□ 0.33
SREK1-216ENST00000612404 SLC35G4P0C7Q5 338 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 HIST1H2ADP20671 130 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 ITPKAP23677 461 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 MAP4P27816 1152 aaKnown RBP17.14■□□□□ 0.33
SREK1-216ENST00000612404 AVPR2P30518 371 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 RPIAP49247 311 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 CLCNKAP51800 687 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 DMPKQ09013 629 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 BST1Q10588 318 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 FBXO48Q5FWF7 155 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 CFAP157Q5JU67 520 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 CES4AQ5XG92 561 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 PDZD3Q86UT5 571 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 C11orf74Q86VG3 221 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 IQCHQ86VS3 1027 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 MCOLN3Q8TDD5 553 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 CHMP6Q96FZ7 201 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 HIST1H2AHQ96KK5 128 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 TMEM237Q96Q45 408 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 HIST1H2AJQ99878 128 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 H2AFJQ9BTM1 129 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 FAM107BQ9H098 131 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 RABEP2Q9H5N1 569 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 SLCO1B3Q9NPD5 702 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 ACSL5Q9ULC5 683 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 GMNCA6NCL1 334 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 TLR4O00206 839 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 IFRD1O00458 451 aaPredicted RBP17.14■□□□□ 0.33
SREK1-216ENST00000612404 SLC16A5O15375 505 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 GPR37L1O60883 481 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 H2AFYO75367 372 aaKnown RBP17.14■□□□□ 0.33
SREK1-216ENST00000612404 PSIP1O75475 530 aaKnown RBP17.14■□□□□ 0.33
SREK1-216ENST00000612404 IDSP22304 550 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 MAPK9P45984 424 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 DNAJB13P59910 316 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 NFKB2Q00653 900 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 CTBSQ01459 385 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 EIF2B5Q13144 721 aaKnown RBP17.14■□□□□ 0.33
SREK1-216ENST00000612404 LYSMD4Q5XG99 296 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 RGS9BPQ6ZS82 235 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 PARGQ86W56 976 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 C1orf216Q8TAB5 229 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 GATA5Q9BWX5 397 aaPredicted RBP17.14■□□□□ 0.33
SREK1-216ENST00000612404 WWP1Q9H0M0 922 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 ARL15Q9NXU5 204 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 ST14Q9Y5Y6 855 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 DGKBQ9Y6T7 804 aa17.14■□□□□ 0.33
SREK1-216ENST00000612404 FAM86C2PA6NEL3 165 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 KLF11O14901 512 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 BCAT2O15382 392 aaPredicted RBP17.13■□□□□ 0.33
SREK1-216ENST00000612404 HRO43593 1189 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 CATP04040 527 aaKnown RBP17.13■□□□□ 0.33
SREK1-216ENST00000612404 ENO2P09104 434 aaPredicted RBP17.13■□□□□ 0.33
SREK1-216ENST00000612404 GRK2P25098 689 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 AK4P27144 223 aaPredicted RBP17.13■□□□□ 0.33
SREK1-216ENST00000612404 BDKRB1P46663 353 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 CSNK1EP49674 416 aaKnown RBP17.13■□□□□ 0.33
SREK1-216ENST00000612404 OVGP1Q12889 678 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 LRP8Q14114 963 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 PMS2CLQ68D20 193 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 MBOAT1Q6ZNC8 495 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 LRRC34Q8IZ02 419 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 CCL4L1Q8NHW4 92 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 ZNF317Q96PQ6 595 aaPredicted RBP17.13■□□□□ 0.33
SREK1-216ENST00000612404 CAAP1Q9H8G2 361 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 RDH14Q9HBH5 336 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 DNAJC28Q9NX36 388 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 TMCO1Q9UM00 188 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 CFAP20Q9Y6A4 193 aaKnown RBP17.13■□□□□ 0.33
SREK1-216ENST00000612404 WDR87Q6ZQQ6 2873 aa17.13■□□□□ 0.33
SREK1-216ENST00000612404 ATXN2Q99700 1313 aaKnown RBP17.12■□□□□ 0.33
SREK1-216ENST00000612404 KRT87PA6NCN2 255 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 PDZK1P1A8MUH7 402 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 ARHGEF33A8MVX0 844 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 SIX3O95343 332 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms