RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 VSTM4Q8IW00 320 aa16.25■□□□□ 0.19
TVP23A-210ENST00000612195 SYTL1Q8IYJ3 562 aa16.25■□□□□ 0.19
TVP23A-210ENST00000612195 ZBTB2Q8N680 514 aa16.25■□□□□ 0.19
TVP23A-210ENST00000612195 OR13C4Q8NGS5 318 aa16.25■□□□□ 0.19
TVP23A-210ENST00000612195 HM13Q8TCT9 377 aa16.25■□□□□ 0.19
TVP23A-210ENST00000612195 KLHL25Q9H0H3 589 aa16.25■□□□□ 0.19
TVP23A-210ENST00000612195 SYTL2Q9HCH5 934 aa16.25■□□□□ 0.19
TVP23A-210ENST00000612195 CRLS1Q9UJA2 301 aa16.25■□□□□ 0.19
TVP23A-210ENST00000612195 PIKFYVEQ9Y2I7 2098 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 TCP11X1B4DZS4 312 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 H7C0C1 242 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 MATN2O00339 956 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 BTN3A1O00481 513 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 MSL3P1P0C860 447 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 ATP5OP48047 213 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 LMAN1P49257 510 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 PRLHRP49683 370 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 TMPRSS15P98073 1019 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 MSLNQ13421 630 aaPredicted RBP16.24■□□□□ 0.19
TVP23A-210ENST00000612195 EIF2S3LQ2VIR3 472 aaKnown RBP16.24■□□□□ 0.19
TVP23A-210ENST00000612195 PTCHD3Q3KNS1 767 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 ITPRIPL1Q6GPH6 555 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 BBS12Q6ZW61 710 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 MED25Q71SY5 747 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 NXPE1Q8N323 547 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 RBMXL3Q8N7X1 1067 aaKnown RBP16.24■□□□□ 0.19
TVP23A-210ENST00000612195 TMEM102Q8N9M5 508 aaPredicted RBP16.24■□□□□ 0.19
TVP23A-210ENST00000612195 PHC3Q8NDX5 983 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 ULK4Q96C45 1275 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 RBM41Q96IZ5 413 aaKnown RBP16.24■□□□□ 0.19
TVP23A-210ENST00000612195 COPS8Q99627 209 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 PITPNM3Q9BZ71 974 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 SLAMF7Q9NQ25 335 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 SERTAD3Q9UJW9 196 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 PCSK5Q92824 1860 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 DOPEY1Q5JWR5 2465 aa16.24■□□□□ 0.19
TVP23A-210ENST00000612195 C17orf113A0A1B0GUU1 675 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 CCL22O00626 93 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 MAP3K7O43318 606 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 ATP1B2P14415 290 aaPredicted RBP16.23■□□□□ 0.19
TVP23A-210ENST00000612195 PVRP15151 417 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 HADHBP55084 474 aaKnown RBP16.23■□□□□ 0.19
TVP23A-210ENST00000612195 MRPL49Q13405 166 aaKnown RBP16.23■□□□□ 0.19
TVP23A-210ENST00000612195 RAPSNQ13702 412 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 ATP1A4Q13733 1029 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 NCF4Q15080 339 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 SLC6A19Q695T7 634 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 SNX20Q7Z614 316 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 GLIS1Q8NBF1 620 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 KRT35Q92764 455 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 PNPLA2Q96AD5 504 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 TRAPPC9Q96Q05 1148 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 SLC7A5P2Q9GIP4 190 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 OR52A5Q9H2C5 316 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 TFB2MQ9H5Q4 396 aaKnown RBP16.23■□□□□ 0.19
TVP23A-210ENST00000612195 COG4Q9H9E3 785 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 CASS4Q9NQ75 786 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 GPR83Q9NYM4 423 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 MAP10Q9P2G4 905 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 G3BP2Q9UN86 482 aaKnown RBP16.23■□□□□ 0.19
TVP23A-210ENST00000612195 CCDC88CQ9P219 2028 aa16.23■□□□□ 0.19
TVP23A-210ENST00000612195 CFAP99D6REC4 459 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 E7EQ34 232 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 APOC4-APOC2K7ER74 178 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 ZNF749O43361 778 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 CRTAMO95727 393 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 APOC2P02655 101 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 PSMB4P28070 264 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 PDHA2P29803 388 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 MAGEA1P43355 309 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 CDKN1CP49918 316 aaPredicted RBP16.22■□□□□ 0.19
TVP23A-210ENST00000612195 RRADP55042 308 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 PRKG2Q13237 762 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 ZNF658BQ4V348 819 aaPredicted RBP16.22■□□□□ 0.19
TVP23A-210ENST00000612195 ANKRD20A2Q5SQ80 823 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 CCDC181Q5TID7 509 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 ANKRD20A1Q5TYW2 823 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 ANKRD20A3Q5VUR7 823 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 CDHR3Q6ZTQ4 885 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 MICALCLQ6ZW33 695 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 HPS6Q86YV9 775 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 OR52E1Q8NGJ3 308 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 SMAD5Q99717 465 aaKnown RBP16.22■□□□□ 0.19
TVP23A-210ENST00000612195 DPH2Q9BQC3 489 aaPredicted RBP16.22■□□□□ 0.19
TVP23A-210ENST00000612195 XKR8Q9H6D3 395 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 CUEDC1Q9NWM3 386 aaPredicted RBP16.22■□□□□ 0.19
TVP23A-210ENST00000612195 TFR2Q9UP52 801 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 AAR2Q9Y312 384 aaKnown RBP16.22■□□□□ 0.19
TVP23A-210ENST00000612195 FER1L5A0AVI2 2057 aa16.22■□□□□ 0.19
TVP23A-210ENST00000612195 CREBBPQ92793 2442 aa16.21■□□□□ 0.19
TVP23A-210ENST00000612195 A1L4Q6 167 aa16.21■□□□□ 0.19
TVP23A-210ENST00000612195 IFRD1O00458 451 aaPredicted RBP16.21■□□□□ 0.19
TVP23A-210ENST00000612195 KRT86O43790 486 aa16.21■□□□□ 0.19
TVP23A-210ENST00000612195 ITGALP20701 1170 aa16.21■□□□□ 0.19
TVP23A-210ENST00000612195 OTX2P32243 289 aa16.21■□□□□ 0.19
TVP23A-210ENST00000612195 CD151P48509 253 aa16.21■□□□□ 0.19
TVP23A-210ENST00000612195 ZNF140P52738 457 aaPredicted RBP16.21■□□□□ 0.19
TVP23A-210ENST00000612195 PRPSAP1Q14558 356 aa16.21■□□□□ 0.19
TVP23A-210ENST00000612195 ZNF385CQ66K41 422 aaPredicted RBP16.21■□□□□ 0.19
TVP23A-210ENST00000612195 DENND5AQ6IQ26 1287 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms