RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CPNE5Q9HCH3 593 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 SYBUQ9NX95 663 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 OGFRQ9NZT2 677 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 RNF14Q9UBS8 474 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 RARRES3Q9UL19 164 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 SOX13Q9UN79 622 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 SAR1BQ9Y6B6 198 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 C2orf74A8MZ97 194 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 K7ENP7 123 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 RAD1O60671 282 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 VAPBO95292 243 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 ZBTB11O95625 1053 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-208ENST00000612050 CCNYL3P0C7X3 344 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 MAGEA6P43360 314 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 PREPP48147 710 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 HSD11B2P80365 405 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 HSPA14Q0VDF9 509 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 KCNJ11Q14654 390 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 DNAJC21Q5F1R6 531 aaKnown RBP12.01□□□□□ -0.49
CBWD3-208ENST00000612050 TTC27Q6P3X3 843 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 INO80CQ6PI98 192 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-208ENST00000612050 SYDE1Q6ZW31 735 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-208ENST00000612050 OTOAQ7RTW8 1153 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 AMIGO1Q86WK6 493 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 TBC1D21Q8IYX1 336 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 ESX1Q8N693 406 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 LSM14AQ8ND56 463 aaKnown RBP12.01□□□□□ -0.49
CBWD3-208ENST00000612050 MCUQ8NE86 351 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 CALML6Q8TD86 181 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 COG1Q8WTW3 980 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 SKA2Q8WVK7 121 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-208ENST00000612050 KLHL6Q8WZ60 621 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 N4BP2L2Q92802 583 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-208ENST00000612050 ZNF778Q96MU6 729 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 CTRCQ99895 268 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 ARHGAP9Q9BRR9 750 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 HGH1Q9BTY7 390 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 ULBP3Q9BZM4 244 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 OR52A5Q9H2C5 316 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 TFB2MQ9H5Q4 396 aaKnown RBP12.01□□□□□ -0.49
CBWD3-208ENST00000612050 TDRKHQ9Y2W6 561 aaKnown RBP12.01□□□□□ -0.49
CBWD3-208ENST00000612050 MAD1L1Q9Y6D9 718 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 PIKFYVEQ9Y2I7 2098 aa12.01□□□□□ -0.49
CBWD3-208ENST00000612050 E5RI56 91 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 CCDC188H7C350 402 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 ERVH48-1M5A8F1 160 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 STK17BO94768 372 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 ITGB6P18564 788 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 NELFEP18615 380 aaKnown RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 POLR2CP19387 275 aaPredicted RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 OGNP20774 298 aaKnown RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 NMBRP28336 390 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 EIF3BP55884 814 aaKnown RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 PDAP1Q13442 181 aaKnown RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 TUBB3Q13509 450 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 DHX34Q14147 1143 aaKnown RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 TGIF1Q15583 401 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 KIAA0930Q6ICG6 404 aaPredicted RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 LMNTD2Q8IXW0 634 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 LILRA3Q8N6C8 439 aaPredicted RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 BMPERQ8N8U9 685 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 OR8K5Q8NH50 307 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 MAGEC3Q8TD91 643 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 JPH3Q8WXH2 748 aaPredicted RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 ZNF669Q96BR6 464 aaPredicted RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 CAPZA3Q96KX2 299 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 FCRL4Q96PJ5 515 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 SLC7A5P2Q9GIP4 190 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 GPN2Q9H9Y4 310 aaPredicted RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 SYTL2Q9HCH5 934 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 C1GALT1Q9NS00 363 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 TREX1Q9NSU2 369 aa12□□□□□ -0.49
CBWD3-208ENST00000612050 ANKRD11Q6UB99 2663 aaPredicted RBP12□□□□□ -0.49
CBWD3-208ENST00000612050 FREM2Q5SZK8 3169 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 FAM237BA0A1B0GVD1 139 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 GOLGA8MH3BSY2 632 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 SMAPO00193 183 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 ZNF185O15231 689 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 OR1I1O60431 355 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 ESR1P03372 595 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 PDHA2P29803 388 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 CSE1LP55060 971 aaKnown RBP11.99□□□□□ -0.49
CBWD3-208ENST00000612050 MC1RQ01726 317 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 ABHD18Q0P651 414 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 PRKG2Q13237 762 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 MAP7Q14244 749 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 ZNF534Q76KX8 674 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 DTX1Q86Y01 620 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 PHC3Q8NDX5 983 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 OR52E1Q8NGJ3 308 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 OR5K2Q8NHB8 316 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 CPT1BQ92523 772 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 NKD1Q969G9 470 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 SLC22A18Q96BI1 424 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 MFSD3Q96ES6 412 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 CRELD1Q96HD1 420 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 SERPINB12Q96P63 405 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 MAP3K3Q99759 626 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 NAT9Q9BTE0 207 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 RAB11FIP5Q9BXF6 653 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms