RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 INPP5JQ15735 1006 aaPredicted RBP12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 TAZQ16635 292 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 EIF2S3LQ2VIR3 472 aaKnown RBP12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 BCL7AQ4VC05 210 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 SLC6A19Q695T7 634 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 JMJD6Q6NYC1 403 aaPredicted RBP12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 TRIM73Q86UV7 250 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 PHC3Q8NDX5 983 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 PRR7Q8TB68 274 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 DTX3LQ8TDB6 740 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 KRT35Q92764 455 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 COPS8Q99627 209 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 FERMT1Q9BQL6 677 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 NLNQ9BYT8 704 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 SLC29A3Q9BZD2 475 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 LATS2Q9NRM7 1088 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 C1GALT1Q9NS00 363 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 PCMTD2Q9NV79 361 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 IRAK4Q9NWZ3 460 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 GPR83Q9NYM4 423 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 TFR2Q9UP52 801 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 MAP4K5Q9Y4K4 846 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 HEBP2Q9Y5Z4 205 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 ALG6Q9Y672 507 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 CENPEQ02224 2701 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 SNRNP200O75643 2136 aaKnown RBP12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 MDC1Q14676 2089 aaKnown RBP12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 HACD1B0YJ81 288 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 BTN3A3O00478 584 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 LDB2O43679 373 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 SGTAO43765 313 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 PRDX3P30048 256 aaKnown RBP12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 SPARCL1Q14515 664 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 PRPSAP1Q14558 356 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 SLC9A5Q14940 896 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 NCF4Q15080 339 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 ZRANB3Q5FWF4 1079 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 C1orf189Q5VU69 101 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 TAS2R42Q7RTR8 314 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 RAB43Q86YS6 212 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 VSTM4Q8IW00 320 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 KATNAL2Q8IYT4 538 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 NXPE1Q8N323 547 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 OR52E1Q8NGJ3 308 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 ADAMTS17Q8TE56 1095 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 ZFPM2Q8WW38 1151 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 ULK4Q96C45 1275 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 GORASP1Q9BQQ3 440 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 CCM2Q9BSQ5 444 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 COG4Q9H9E3 785 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 SERTAD3Q9UJW9 196 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 PADI2Q9Y2J8 665 aa12.96□□□□□ -0.33
HMGB1P24-201ENST00000611897 CCDC78A2IDD5 438 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 C5orf60A6NFR6 353 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 TCP11X1B4DZS4 312 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 E7EQ34 232 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 MATN2O00339 956 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 KCNN4O15554 427 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 KRT86O43790 486 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 STK10O94804 968 aaKnown RBP12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 CRTAMO95727 393 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 RAB40ALP0C0E4 278 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 PYGMP11217 842 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 ATP1B2P14415 290 aaPredicted RBP12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 MC4RP32245 332 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 RORAP35398 523 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 MAGEA1P43355 309 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 RRADP55042 308 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 OTUD4Q01804 1114 aaKnown RBP12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 BRD3Q15059 726 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 MLIPQ5VWP3 458 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 ZNF449Q6P9G9 518 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 SARM1Q6SZW1 724 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 ZNF517Q6ZMY9 492 aaPredicted RBP12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 BBS12Q6ZW61 710 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 CDKL3Q8IVW4 592 aaPredicted RBP12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 GPR135Q8IZ08 494 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 RCOR2Q8IZ40 523 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 CARFQ8N187 725 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 ZBTB2Q8N680 514 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 Q8NA96 180 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 RNF214Q8ND24 703 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 CCDC110Q8TBZ0 833 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 ACTL9Q8TC94 416 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 SGSM3Q96HU1 749 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 DNAJC1Q96KC8 554 aaKnown RBP12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 LRFN5Q96NI6 719 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 MLXIPLQ9NP71 852 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 GPN3Q9UHW5 284 aaPredicted RBP12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 PCSK5Q92824 1860 aa12.95□□□□□ -0.34
HMGB1P24-201ENST00000611897 SVILO95425 2214 aa12.94□□□□□ -0.34
HMGB1P24-201ENST00000611897 KLHL33A6NCF5 533 aa12.94□□□□□ -0.34
HMGB1P24-201ENST00000611897 C2orf74A8MZ97 194 aa12.94□□□□□ -0.34
HMGB1P24-201ENST00000611897 APOC4-APOC2K7ER74 178 aa12.94□□□□□ -0.34
HMGB1P24-201ENST00000611897 ZNF749O43361 778 aa12.94□□□□□ -0.34
HMGB1P24-201ENST00000611897 APOC2P02655 101 aa12.94□□□□□ -0.34
HMGB1P24-201ENST00000611897 PRSS56P0CW18 603 aa12.94□□□□□ -0.34
HMGB1P24-201ENST00000611897 AGXTP21549 392 aa12.94□□□□□ -0.34
HMGB1P24-201ENST00000611897 PDHA2P29803 388 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms