RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 AASDHPPTQ9NRN7 309 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 KCNK6Q9Y257 313 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 WDR37Q9Y2I8 494 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 GPSM3Q9Y4H4 160 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 TNRC6BQ9UPQ9 1833 aaKnown RBP11.31□□□□□ -0.6
CTCFL-221ENST00000608903 KMT2EQ8IZD2 1858 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 SPTY2D1-AS1A0A0U1RR47 76 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 A8MT66 165 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 MEI4A8MW99 385 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 GPR89AB7ZAQ6 455 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 KMOO15229 486 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 MATN4O95460 622 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 EML2O95834 649 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 RBP1P09455 135 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 GPR89BP0CG08 455 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 MPC1LP0DKB6 136 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 ITPKAP23677 461 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 ACADLP28330 430 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 NUDT1P36639 197 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 CCR10P46092 362 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 SRP54P61011 504 aaKnown RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 TTLL9Q3SXZ7 439 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 CCSMST1Q4G0I0 132 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 METRNLQ641Q3 311 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 MBOAT1Q6ZNC8 495 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 RPS27LQ71UM5 84 aaKnown RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 RHEBL1Q8TAI7 183 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 HM13Q8TCT9 377 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 GAB3Q8WWW8 586 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 GLMNQ92990 594 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 TSNARE1Q96NA8 513 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 NRTNQ99748 197 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 TMEM168Q9H0V1 697 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 OXSMQ9NWU1 459 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 UTP6Q9NYH9 597 aaKnown RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 ARL2BPQ9Y2Y0 163 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 ASB1Q9Y576 335 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 DNMT3AQ9Y6K1 912 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 TDRD6O60522 2096 aaKnown RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 ZFC3H1O60293 1989 aaKnown RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 GFYI3L273 518 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 TNFRSF10CO14798 259 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 LIN7AO14910 233 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 KPNA5O15131 536 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 ITM2AO43736 263 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 KERAO60938 352 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 CELA2BP08218 269 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 AK4P27144 223 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 RGS4P49798 205 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 SEPT7Q16181 437 aaKnown RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.3□□□□□ -0.6
CTCFL-221ENST00000608903 KLC3Q6P597 504 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 NRROSQ86YC3 692 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 NUDCD3Q8IVD9 361 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 MYO1HQ8N1T3 1032 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 FITM2Q8N6M3 262 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 MFSD2AQ8NA29 543 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 STAG3L4Q8TBR4 150 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 TMEM159Q96B96 161 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 KLHDC7BQ96G42 594 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 TSSK1BQ9BXA7 367 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 ZDHHC5Q9C0B5 715 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 RMI1Q9H9A7 625 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 TMEM74BQ9NUR3 256 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 KLQ9UEF7 1012 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 PSMD13Q9UNM6 376 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 SLC12A4Q9UP95 1085 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 PDE10AQ9Y233 779 aa11.3□□□□□ -0.6
CTCFL-221ENST00000608903 SPAG17Q6Q759 2223 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 EIF3FO00303 357 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 BIRC5O15392 142 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 KLK8O60259 260 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 MGRN1O60291 552 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 UBOX5O94941 541 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 MYL2P10916 166 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 ENO3P13929 434 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 RPL10P27635 214 aaKnown RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 CD38P28907 300 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 AGTR2P50052 363 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 THOP1P52888 689 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 RACK1P63244 317 aaKnown RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 DMPKQ09013 629 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 CHI3L2Q15782 390 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 PLK5Q496M5 336 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 PRAMEF14Q5SWL7 426 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 PMS2CLQ68D20 193 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 NEK10Q6ZWH5 1172 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 GALNT13Q8IUC8 556 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 HID1Q8IV36 788 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 CFAP61Q8NHU2 1237 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 ESAMQ96AP7 390 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 PHF21BQ96EK2 531 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 OR2M4Q96R27 311 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 TIMM29Q9BSF4 260 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 GATA5Q9BWX5 397 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 CIDEBQ9UHD4 219 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 FBXO4Q9UKT5 387 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 RNF112Q9ULX5 631 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 PRAMEF33A0A0G2JMD5 474 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms