RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CYB5AP00167 134 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 ADH1AP07327 375 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 PEPDP12955 493 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 WSCD2Q2TBF2 565 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 ZSWIM3Q96MP5 696 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 TCF7L1Q9HCS4 588 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 MEIS2O14770 477 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 PGLSO95336 258 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 IL12BP29460 328 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 RAB15P59190 212 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 PDCD4Q53EL6 469 aaKnown RBP9.47□□□□□ -0.89
CSMD1-217ENST00000602723 CERS6Q6ZMG9 384 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 SRFBP1Q8NEF9 429 aaKnown RBP9.47□□□□□ -0.89
CSMD1-217ENST00000602723 CHRAC1Q9NRG0 131 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 FARSBQ9NSD9 589 aaKnown RBP9.47□□□□□ -0.89
CSMD1-217ENST00000602723 TLR5O60602 858 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 CLDN11O75508 207 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 MASP1P48740 699 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 LAPTM5Q13571 262 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 TUBA3CQ13748 450 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 PLEKHG6Q3KR16 790 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 XKR4Q5GH76 650 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 CHRDL2Q6WN34 429 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 GPR135Q8IZ08 494 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 OR2L8Q8NGY9 312 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 PMM1Q92871 262 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 CPXM1Q96SM3 734 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 POLR2J3Q9H1A7 115 aaKnown RBP9.47□□□□□ -0.89
CSMD1-217ENST00000602723 COQ10BQ9H8M1 238 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 TCAF1Q9Y4C2 921 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 SPTBN1Q01082 2364 aaKnown RBP9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3DA0A087WVF3 549 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3IA0A087WXS9 549 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3EA0A087X179 549 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3KA0A087X1G2 549 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3FA6NER0 549 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3LB9A6J9 549 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 PER2O15055 1255 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3HP0C7X1 549 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 SNAP47Q5SQN1 464 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3GQ6DHY5 549 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3CQ6IPX1 549 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 FAM129CQ86XR2 697 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 MCEMP1Q8IX19 187 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 TBC1D3Q8IZP1 549 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-217ENST00000602723 CERKQ8TCT0 537 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 PHPT1Q9NRX4 125 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-217ENST00000602723 OSER1Q9NX31 292 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 ABCA1O95477 2261 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 UGT2B4P06133 528 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 PAX3P23760 479 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 SYVN1Q86TM6 617 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 CEP76Q8TAP6 659 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 OR51V1Q9H2C8 321 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 KIAA1522Q9P206 1035 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-217ENST00000602723 ARHGAP23Q9P227 1491 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 H3BM21 787 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 GNB5O14775 395 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 C1RP00736 705 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 FESP07332 822 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 RAP2AP10114 183 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 RBM20Q5T481 1227 aaKnown RBP9.46□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF627Q7L945 461 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 KCTD7Q96MP8 289 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 CADM1Q9BY67 442 aaKnown RBP9.46□□□□□ -0.89
CSMD1-217ENST00000602723 ALG5Q9Y673 324 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 SALL3Q9BXA9 1300 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 PPEF2O14830 753 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 XKP51811 444 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 MSANTD2Q6P1R3 559 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 PAOXQ6QHF9 649 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 PLPPR4Q7Z2D5 763 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 LRRC52Q8N7C0 313 aa9.46□□□□□ -0.89
CSMD1-217ENST00000602723 CNDP2Q96KP4 475 aaKnown RBP9.46□□□□□ -0.89
CSMD1-217ENST00000602723 A0A1W2PQH9 124 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 ZSCAN5BA6NJL1 495 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 MAFO75444 373 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 CD36P16671 472 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 KELP23276 732 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 SLC6A4P31645 630 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 PTPN9P43378 593 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 TARDBPQ13148 414 aaKnown RBP eCLIP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 AKAP1Q92667 903 aaKnown RBP eCLIP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 ZNF471Q9BX82 626 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 EIF2B4Q9UI10 523 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 REXO2Q9Y3B8 237 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 CNTNAP1P78357 1384 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 DAPL1A0PJW8 107 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 NPHS1O60500 1241 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 APOL3O95236 402 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 PGAM2P15259 253 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 RBM34P42696 430 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 KLF1Q13351 362 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 MED27Q6P2C8 311 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 C2orf73Q8N5S3 287 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 C12orf50Q8NA57 414 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 GLB1L3Q8NCI6 653 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 LSM14AQ8ND56 463 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 STYXQ8WUJ0 223 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 NKD2Q969F2 451 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms