RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 DPH2Q9BQC3 489 aaPredicted RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 GORASP1Q9BQQ3 440 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 DHRS4Q9BTZ2 278 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 CHRNA10Q9GZZ6 450 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 SPRTNQ9H040 489 aaPredicted RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 OR52A5Q9H2C5 316 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 TFB2MQ9H5Q4 396 aaKnown RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 HACD3Q9P035 362 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 TMEM63CQ9P1W3 806 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 CTTNBP2NLQ9P2B4 639 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 SAE1Q9UBE0 346 aaPredicted RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 SERTAD3Q9UJW9 196 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 CSAG2Q9Y5P2 127 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 DIDO1Q9BTC0 2240 aaKnown RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 MDC1Q14676 2089 aaKnown RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 PIKFYVEQ9Y2I7 2098 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 NF1P21359 2839 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 ADGRG4Q8IZF6 3080 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 AKAP9Q99996 3911 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 DCHS2Q6V1P9 2916 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 IGLV3-16A0A075B6K0 115 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 C17orf113A0A1B0GUU1 675 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 KLHL33A6NCF5 533 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 SMTNL1A8MU46 457 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 F5H423 210 aaPredicted RBP5.91□□□□□ -1.46
VRK3-220ENST00000600259 MATN2O00339 956 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 APOL1O14791 398 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 PPP1R12AO14974 1030 aaPredicted RBP5.91□□□□□ -1.46
VRK3-220ENST00000600259 SRP72O76094 671 aaKnown RBP5.91□□□□□ -1.46
VRK3-220ENST00000600259 AGTP01019 485 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 GYPCP04921 128 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 PECAM1P16284 738 aaPredicted RBP5.91□□□□□ -1.46
VRK3-220ENST00000600259 ZFXP17010 805 aaPredicted RBP5.91□□□□□ -1.46
VRK3-220ENST00000600259 HLA-DPA1P20036 260 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 MSH3P20585 1137 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ITGAXP20702 1163 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 CYP2A7P20853 494 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ELAVL4P26378 380 aaKnown RBP5.91□□□□□ -1.46
VRK3-220ENST00000600259 OTX2P32243 289 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ADRA1AP35348 466 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 CDKN2BP42772 138 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 GLRBP48167 497 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ITGA9Q13797 1035 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 MESDQ14696 234 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 LLGL1Q15334 1064 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ZRSR2Q15696 482 aaKnown RBP5.91□□□□□ -1.46
VRK3-220ENST00000600259 PPP2R5EQ16537 467 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 LONRF2Q1L5Z9 754 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 LRRC38Q5VT99 294 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 MLIPQ5VWP3 458 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 DENND5AQ6IQ26 1287 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 RHBDD2Q6NTF9 364 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ARMC6Q6NXE6 501 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 RAB43Q86YS6 212 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 CFAP206Q8IYR0 622 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ZNF567Q8N184 647 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 DNAJC22Q8N4W6 341 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ST6GALNAC3Q8NDV1 305 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 OR2Y1Q8NGV0 311 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 SLC35G2Q8TBE7 412 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 CPLX3Q8WVH0 158 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 UBE2Q2Q8WVN8 375 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 LCN9Q8WX39 176 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 PTERQ96BW5 349 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 SGSM3Q96HU1 749 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 FER1L6-AS2Q96M78 137 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ZNF830Q96NB3 372 aaPredicted RBP5.91□□□□□ -1.46
VRK3-220ENST00000600259 CCM2Q9BSQ5 444 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ZCCHC2Q9C0B9 1178 aaKnown RBP5.91□□□□□ -1.46
VRK3-220ENST00000600259 KLHL25Q9H0H3 589 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 SRMSQ9H3Y6 488 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 IGSF5Q9NSI5 407 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 SOHLH2Q9NX45 425 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 P4HTMQ9NXG6 502 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 MAP10Q9P2G4 905 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 FKBPLQ9UIM3 349 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ENTPD4Q9Y227 616 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 CDYLQ9Y232 598 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ARL5AQ9Y689 179 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 COLEC10Q9Y6Z7 277 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 CCDC168Q8NDH2 2452 aa5.91□□□□□ -1.46
VRK3-220ENST00000600259 ZFHX3Q15911 3703 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 CELSR1Q9NYQ6 3014 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 TRBV5-4A0A0C4DH59 114 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 CCDC78A2IDD5 438 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 CCDC66A2RUB6 948 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 E7EQ34 232 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 STX7O15400 261 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 LRRTM2O43300 516 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 HNRNPRO43390 633 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 LDB2O43679 373 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 PRAMEF1O95521 474 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 IGHEP01854 428 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 STSP08842 583 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 HBQ1P09105 142 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 SLC35G4P0C7Q5 338 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 TMEM253P0C7T8 217 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 PYGMP11217 842 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 ATP1B2P14415 290 aaPredicted RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 AGXTP21549 392 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms