RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 HDDC3Q8N4P3 179 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 BLOC1S5Q8TDH9 187 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 RELTQ969Z4 430 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 STAMBPL1Q96FJ0 436 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 TOE1Q96GM8 510 aaKnown RBP10.29□□□□□ -0.76
SMG9-207ENST00000598860 SIGLEC10Q96LC7 697 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 RTKNQ9BST9 563 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 NEUROG2Q9H2A3 272 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 SAYSD1Q9NPB0 183 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 SYBUQ9NX95 663 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 FBXL12Q9NXK8 326 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 KCTD5Q9NXV2 234 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 WSB2Q9NYS7 404 aaPredicted RBP10.29□□□□□ -0.76
SMG9-207ENST00000598860 USP36Q9P275 1121 aaKnown RBP10.29□□□□□ -0.76
SMG9-207ENST00000598860 SARDHQ9UL12 918 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 TCAF1Q9Y4C2 921 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 C1orf232A0A0U1RR37 186 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 FAM237BA0A1B0GVD1 139 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 TCRBV5S2A0A599 114 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 OR14I1A6ND48 311 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 SLC30A4O14863 429 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 AREL1O15033 823 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 KDM1AO60341 852 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 USP1O94782 785 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 LPOP22079 712 aaPredicted RBP10.28□□□□□ -0.76
SMG9-207ENST00000598860 SDHAP31040 664 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 HMGCLP35914 325 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 MMP12P39900 470 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 SCAND1P57086 179 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 FAM193AP78312 1265 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 CNTN1Q12860 1018 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 MSLNQ13421 630 aaPredicted RBP10.28□□□□□ -0.76
SMG9-207ENST00000598860 OLIG2Q13516 323 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 POU6F1Q14863 301 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 PCBP2Q15366 365 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMG9-207ENST00000598860 SKIDA1Q1XH10 827 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 TMEM52BQ4KMG9 183 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 CATSPEREQ5SY80 951 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 FNBP1LQ5T0N5 605 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 CERCAMQ5T4B2 595 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 PIP5KL1Q5T9C9 394 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 STPG1Q5TH74 334 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 AGBL4Q5VU57 503 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 TCEAL6Q6IPX3 200 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 NEK5Q6P3R8 708 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 CASC4Q6P4E1 433 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 TRMT10CQ7L0Y3 403 aaKnown RBP10.28□□□□□ -0.76
SMG9-207ENST00000598860 ZBED8Q8IZ13 594 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 MYO1HQ8N1T3 1032 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 AADATQ8N5Z0 425 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 GABPB2Q8TAK5 448 aaPredicted RBP10.28□□□□□ -0.76
SMG9-207ENST00000598860 GANCQ8TET4 914 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 AENQ8WTP8 325 aaKnown RBP10.28□□□□□ -0.76
SMG9-207ENST00000598860 PYROXD1Q8WU10 500 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 STYXQ8WUJ0 223 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 TCEAL3Q969E4 200 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 CAVIN3Q969G5 261 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 EBNA1BP2Q99848 306 aaKnown RBP10.28□□□□□ -0.76
SMG9-207ENST00000598860 KIFC1Q9BW19 673 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 GPR174Q9BXC1 333 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 GPR63Q9BZJ6 419 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 EPB41L4BQ9H329 900 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 SGK2Q9HBY8 427 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 PREBQ9HCU5 417 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 CD93Q9NPY3 652 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 PKD2L2Q9NZM6 624 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 PILRBQ9UKJ0 227 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 MAD1L1Q9Y6D9 718 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 TEX264Q9Y6I9 313 aa10.28□□□□□ -0.76
SMG9-207ENST00000598860 ZFC3H1O60293 1989 aaKnown RBP10.27□□□□□ -0.77
SMG9-207ENST00000598860 UQCRHLA0A096LP55 91 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 RGSL1A5PLK6 1076 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 PRAMEF25A6NGN4 478 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 MROH6A6NGR9 719 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 NPIPB15A6NHN6 443 aaPredicted RBP10.27□□□□□ -0.77
SMG9-207ENST00000598860 PATE3B3GLJ2 98 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 STX7O15400 261 aaKnown RBP10.27□□□□□ -0.77
SMG9-207ENST00000598860 PLRG1O43660 514 aaKnown RBP10.27□□□□□ -0.77
SMG9-207ENST00000598860 AVILO75366 819 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 RNASEH2AO75792 299 aaKnown RBP10.27□□□□□ -0.77
SMG9-207ENST00000598860 CFIP05156 583 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 POLBP06746 335 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 UQCRHP07919 91 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 ALPIP09923 528 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 ELFN1P0C7U0 828 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 TPH1P17752 444 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 CTPS1P17812 591 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 CCND1P24385 295 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 PSMA3P25788 255 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 PHBP35232 272 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 HOXD12P35452 270 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 HNF1BP35680 557 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 HADHAP40939 763 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 ELK3P41970 407 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 MAGEA4P43358 317 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 LIMK1P53667 647 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 IRX4P78413 519 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 DUOXA1Q1HG43 343 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 POM121L1PQ3SYA9 428 aa10.27□□□□□ -0.77
SMG9-207ENST00000598860 SPANXN3Q5MJ09 141 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms