RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 OR1I1O60431 355 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 SUN1O94901 812 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 WISP1O95388 367 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 CXCR5P32302 372 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 FOXN2P32314 431 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 RPL22P35268 128 aaKnown RBP13.39□□□□□ -0.27
SCAF1-203ENST00000598359 FDFT1P37268 417 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 STAT5AP42229 794 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 ABHD18Q0P651 414 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 PRKG2Q13237 762 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 TUBB3Q13509 450 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 SEMA5AQ13591 1074 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 IL11RAQ14626 422 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 GPR19Q15760 415 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 PWWP2BQ6NUJ5 590 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 ARMC6Q6NXE6 501 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 C6orf15Q6UXA7 325 aaPredicted RBP13.39□□□□□ -0.27
SCAF1-203ENST00000598359 ZNF572Q7Z3I7 529 aaPredicted RBP13.39□□□□□ -0.27
SCAF1-203ENST00000598359 OOSP2Q86WS3 158 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 CCDC89Q8N998 374 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 HEXDCQ8WVB3 486 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 HDAC10Q969S8 669 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 SLC45A3Q96JT2 553 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 HGH1Q9BTY7 390 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 FRMD8P1Q9BZ68 369 aaPredicted RBP13.39□□□□□ -0.27
SCAF1-203ENST00000598359 XKR8Q9H6D3 395 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 SEMA5BQ9P283 1151 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 CROTQ9UKG9 612 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 SAR1BQ9Y6B6 198 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 COLEC10Q9Y6Z7 277 aa13.39□□□□□ -0.27
SCAF1-203ENST00000598359 USP9XQ93008 2570 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-203ENST00000598359 C17orf113A0A1B0GUU1 675 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 KLHL33A6NCF5 533 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 TLCD2A6NGC4 264 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 ZNF891A8MT65 544 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-203ENST00000598359 GOT2P00505 430 aaKnown RBP13.38□□□□□ -0.27
SCAF1-203ENST00000598359 NTRK1P04629 796 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 APRTP07741 180 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 FGF5P12034 268 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 ITGB6P18564 788 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 PSMA3P25788 255 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 OAS2P29728 719 aaKnown RBP13.38□□□□□ -0.27
SCAF1-203ENST00000598359 DLSTP36957 453 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 KCNJ1P48048 391 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 ARL4DP49703 201 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 CRADDP78560 199 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 CKAP4Q07065 602 aaKnown RBP13.38□□□□□ -0.27
SCAF1-203ENST00000598359 SEMA3AQ14563 771 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 SKIDA1Q1XH10 827 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 TSTD2Q5T7W7 516 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 C16orf46Q6P387 395 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 PPP1R3BQ86XI6 285 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 ESX1Q8N693 406 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 LCN9Q8WX39 176 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 STARD8Q92502 1023 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 STAMBPL1Q96FJ0 436 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 TLR10Q9BXR5 811 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 TRIT1Q9H3H1 467 aaKnown RBP13.38□□□□□ -0.27
SCAF1-203ENST00000598359 AKIRIN1Q9H9L7 192 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-203ENST00000598359 CASS4Q9NQ75 786 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCAF1-203ENST00000598359 SNX12Q9UMY4 172 aa13.38□□□□□ -0.27
SCAF1-203ENST00000598359 V9GYY5 206 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-203ENST00000598359 HEATR9A2RTY3 570 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 GSAPA4D1B5 854 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 CTAGE15A4D2H0 777 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 SLC9B1P1A6NJY1 282 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 ERI2A8K979 691 aaKnown RBP13.37□□□□□ -0.27
SCAF1-203ENST00000598359 IFRD1O00458 451 aaPredicted RBP13.37□□□□□ -0.27
SCAF1-203ENST00000598359 BTN3A3O00478 584 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 BTN3A1O00481 513 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 CEP104O60308 925 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 GAS8O95995 478 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 FGGP02679 453 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 CTAGE8P0CG41 777 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 TCP1P17987 556 aaKnown RBP13.37□□□□□ -0.27
SCAF1-203ENST00000598359 CSE1LP55060 971 aaKnown RBP13.37□□□□□ -0.27
SCAF1-203ENST00000598359 SESN2P58004 480 aaPredicted RBP13.37□□□□□ -0.27
SCAF1-203ENST00000598359 CDC20Q12834 499 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 CCNG2Q16589 344 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 DEFB109BQ30KR1 87 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
SCAF1-203ENST00000598359 BORAQ6PGQ7 559 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 ZNF534Q76KX8 674 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 LDB1Q86U70 411 aaPredicted RBP13.37□□□□□ -0.27
SCAF1-203ENST00000598359 CTAGE6Q86UF2 777 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 CTAGE4Q8IX94 777 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 ACVR1CQ8NER5 493 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 OR52E1Q8NGJ3 308 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 OR5AR1Q8NGP9 310 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 OR6P1Q8NGX9 317 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 ZFPM2Q8WW38 1151 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 ELMO1Q92556 727 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 TFGQ92734 400 aaPredicted RBP13.37□□□□□ -0.27
SCAF1-203ENST00000598359 RUFY1Q96T51 708 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 CD180Q99467 661 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 KLHL25Q9H0H3 589 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 SRMSQ9H3Y6 488 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 VPS37BQ9H9H4 285 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 PDE7BQ9NP56 450 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms