RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 KXD1Q9BQD3 176 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 SLC25A23Q9BV35 468 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 PHF7Q9BWX1 381 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 SDR39U1Q9NRG7 319 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 OPTCQ9UBM4 332 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 PCDHGA7Q9Y5G6 932 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 GPR45Q9Y5Y3 372 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 KIF26AQ9ULI4 1882 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 KRT87PA6NCN2 255 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 EIF3FO00303 357 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 WNT9AO14904 365 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 INPP4BO15327 924 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 OTCP00480 354 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 IL12RB1P42701 662 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 ELAVL3Q14576 367 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 MMEL1Q495T6 779 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 MILR1Q7Z6M3 343 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 MIER2Q8N344 545 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 RASGEF1AQ8N9B8 481 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 HIPK4Q8NE63 616 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 ELMO1Q92556 727 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 SLC12A9Q9BXP2 914 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 ARL15Q9NXU5 204 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 FAM8A1Q9UBU6 413 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 K7EPI3 171 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 AREL1O15033 823 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 NRP2O60462 931 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 AP2A2O94973 939 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 IL9P15248 144 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 XRCC1P18887 633 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 PLEKHS1Q5SXH7 462 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 FBXL19Q6PCT2 694 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 RETREG3Q86VR2 466 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 CPA6Q8N4T0 437 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 PYDC1Q8WXC3 89 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 DTD2Q96FN9 168 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 VPS35Q96QK1 796 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 NDE1Q9NXR1 346 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 STOML1Q9UBI4 398 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 KIAA1549LQ6ZVL6 1849 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 NR5A2O00482 541 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 MRASO14807 208 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 SOD1P00441 154 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 ANXA5P08758 320 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 MPC1LP0DKB6 136 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 LAMP2P13473 410 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 ADRB3P13945 408 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 IDO1P14902 403 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 ANPEPP15144 967 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 CAPN3P20807 821 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 PSME3P61289 254 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 ABRAXAS2Q15018 415 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 C6orf136Q5SQH8 315 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 IL27RAQ6UWB1 636 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 LAYNQ6UX15 382 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 SPATA19Q7Z5L4 167 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 MMAAQ8IVH4 418 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 SFRP1Q8N474 314 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 TEX37Q96LM6 180 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 SERPINI1Q99574 410 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 RPP25Q9BUL9 199 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 C1orf50Q9BV19 199 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 PARVBQ9HBI1 364 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 AIG1Q9NVV5 245 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 CNOT6Q9ULM6 557 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 ANGPTL3Q9Y5C1 460 aa16.68■□□□□ 0.26
SHKBP1-216ENST00000598201 DENND4AQ7Z401 1863 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 E7ENX8 843 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 H0Y858 1186 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 GFYI3L273 518 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 K7ESM1 405 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 PSMD11O00231 422 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 TSPAN6O43657 245 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 STK16O75716 305 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 C8GP07360 202 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 EPORP19235 508 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 GCKP35557 465 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 PIK3CGP48736 1102 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 MS4A2Q01362 244 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 GSTA3Q16772 222 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 LDLRAP1Q5SW96 308 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 PARM1Q6UWI2 310 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 RAVER1Q8IY67 606 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 NRSN1Q8IZ57 195 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 LILRA3Q8N6C8 439 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 SLC26A7Q8TE54 656 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 P2RY13Q9BPV8 354 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 S100A14Q9HCY8 104 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 RNF11Q9Y3C5 154 aa16.67■□□□□ 0.26
SHKBP1-216ENST00000598201 FFAR3O14843 346 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 GPR42O15529 346 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 MMP20O60882 483 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 RECQL5O94762 991 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 KAT7O95251 611 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 MATN4O95460 622 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 TMEM115Q12893 351 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 RPS6KA2Q15349 733 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 VPS26BQ4G0F5 336 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 SWT1Q5T5J6 900 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms