RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 POLR2CP19387 275 aaPredicted RBP17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 TCN2P20062 427 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 F8A1P23610 371 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 RPL22P35268 128 aaKnown RBP17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 DLSTP36957 453 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 GRIA1P42261 906 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 TUBB4BP68371 445 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 SNX1Q13596 522 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 TUBB2AQ13885 445 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 KCNAB1Q14722 419 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 TMTC4Q5T4D3 741 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 AFTPHQ6ULP2 937 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 TRIM58Q8NG06 486 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 TFGQ92734 400 aaPredicted RBP17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 HDAC10Q969S8 669 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 TUBB2BQ9BVA1 445 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 LZTFL1Q9NQ48 299 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 LHX9Q9NQ69 397 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 EIF2B3Q9NR50 452 aaKnown RBP17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 LATS2Q9NRM7 1088 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 LNPEPQ9UIQ6 1025 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 KCND3Q9UK17 655 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 CROTQ9UKG9 612 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 TCAF1Q9Y4C2 921 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 PRSS21Q9Y6M0 314 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 CCDC78A2IDD5 438 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 OR51F1A6NGY5 319 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 F8W8V4 182 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 TIAF1O95411 115 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 GOT2P00505 430 aaKnown RBP17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 APRTP07741 180 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 OR56A5P0C7T3 313 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 PPARGP37231 505 aaPredicted RBP17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 NFATC3Q12968 1075 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 PWWP2BQ6NUJ5 590 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 PRUNE1Q86TP1 453 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 GLIS1Q8NBF1 620 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 PHC3Q8NDX5 983 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 OR52E1Q8NGJ3 308 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 OR4L1Q8NH43 312 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 ZNF501Q96CX3 271 aaPredicted RBP17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 TLR10Q9BXR5 811 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 FAM117AQ9C073 453 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 SLC25A18Q9H1K4 315 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 SYTL2Q9HCH5 934 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 KCND1Q9NSA2 647 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 SLC2A6Q9UGQ3 507 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 PCDHB3Q9Y5E6 796 aa17.42■□□□□ 0.38
CHMP2A-203ENST00000597209 PIKFYVEQ9Y2I7 2098 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 HELZ2Q9BYK8 2649 aaKnown RBP17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 SLC5A10A0PJK1 596 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 C21orf140B9A014 251 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 AP3B1O00203 1094 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 MSL3P1P0C860 447 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 ACADLP28330 430 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 OAS2P29728 719 aaKnown RBP17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 PREPP48147 710 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 POLE2P56282 527 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 KCNAB2Q13303 367 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 PCID2Q5JVF3 399 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 ZNF534Q76KX8 674 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 AMIGO1Q86WK6 493 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 ZNF778Q96MU6 729 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 PITPNM3Q9BZ71 974 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 HOMER3Q9NSC5 361 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 POLG2Q9UHN1 485 aa17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 HEMK1Q9Y5R4 338 aaPredicted RBP17.41■□□□□ 0.38
CHMP2A-203ENST00000597209 BTN3A3O00478 584 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 BTN3A1O00481 513 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 FGGP02679 453 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 ZSCAN5DPP0CG00 497 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 PRKAR1AP10644 381 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 CDH3P22223 829 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 PRDX3P30048 256 aaKnown RBP17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 ARCN1P48444 511 aaKnown RBP17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 CCZ1BP86790 482 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 CCZ1P86791 482 aaPredicted RBP17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 DNASE1L3Q13609 305 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 FASTKD1Q53R41 847 aaKnown RBP17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 C16orf46Q6P387 395 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 TBC1D21Q8IYX1 336 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 PPHLN1Q8NEY8 458 aaKnown RBP17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 APOBEC4Q8WW27 367 aaKnown RBP17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 ELMO1Q92556 727 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 PPM1MQ96MI6 270 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 LRFN5Q96NI6 719 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 SOHLH2Q9NX45 425 aa17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 MRPS18BQ9Y676 258 aaKnown RBP17.4■□□□□ 0.38
CHMP2A-203ENST00000597209 GSAPA4D1B5 854 aa17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 SLC9B1P1A6NJY1 282 aa17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 C2orf74A8MZ97 194 aa17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 BHMG1C9JSJ3 638 aaPredicted RBP17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 NRDCO43847 1150 aa17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 SLC28A2O43868 658 aa17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 OR1I1O60431 355 aa17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 CPNE3O75131 537 aaKnown RBP17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 SCRG1O75711 98 aa17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 NPY2RP49146 381 aa17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 PRAMEP78395 509 aa17.39■□□□□ 0.37
CHMP2A-203ENST00000597209 GPR19Q15760 415 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms