RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 RBMXL3Q8N7X1 1067 aaKnown RBP15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 FDCSPQ8NFU4 85 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 HEXDCQ8WVB3 486 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 LCN9Q8WX39 176 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 ULK4Q96C45 1275 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 DCUN1D1Q96GG9 259 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 TRAPPC9Q96Q05 1148 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 COPS8Q99627 209 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 NUDT9Q9BW91 350 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 SRMSQ9H3Y6 488 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 COG4Q9H9E3 785 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 PLEKHB1Q9UF11 243 aaPredicted RBP15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 SNX7Q9UNH6 387 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 EFR3BQ9Y2G0 817 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 DOPEY1Q5JWR5 2465 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 ESPL1Q14674 2120 aa15.43■□□□□ 0.06
GTF2F1-203ENST00000594213 SHANK1Q9Y566 2161 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 ITPR2Q14571 2701 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 HIVEP3Q5T1R4 2406 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 CCDC66A2RUB6 948 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 TMEM150CB9EJG8 249 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 H3BMH7 237 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 LDB2O43679 373 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 SEMA7AO75326 666 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 AGFG2O95081 481 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 RNF224P0DH78 156 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 RALBP11234 206 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 PSMB4P28070 264 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 PDHA2P29803 388 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 PREPP48147 710 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 VAV2P52735 878 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 COPS2P61201 443 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 KRT33BQ14525 404 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 PRR30Q53SZ7 412 aaPredicted RBP15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 ANKRD20A2Q5SQ80 823 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 ANKRD20A1Q5TYW2 823 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 ANKRD20A3Q5VUR7 823 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 MICALCLQ6ZW33 695 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 HPS6Q86YV9 775 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 CNGA4Q8IV77 575 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 ADGRF3Q8IZF5 1079 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 TMEM102Q8N9M5 508 aaPredicted RBP15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 PHC3Q8NDX5 983 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 OR52E1Q8NGJ3 308 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 ACTL9Q8TC94 416 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 FERD3LQ96RJ6 166 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 SMAD5Q99717 465 aaKnown RBP15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 FAM96AQ9H5X1 160 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 MVB12BQ9H7P6 319 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 ACTR5Q9H9F9 607 aaPredicted RBP15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 FANCEQ9HB96 536 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 CRLS1Q9UJA2 301 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 TFR2Q9UP52 801 aa15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 AAR2Q9Y312 384 aaKnown RBP15.42■□□□□ 0.06
GTF2F1-203ENST00000594213 CENPEQ02224 2701 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 MYO9AB2RTY4 2548 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 AKR1B15C9JRZ8 316 aaPredicted RBP15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 DPM1O60762 260 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 KLF7O75840 302 aaPredicted RBP15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 CRTAMO95727 393 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 ITGALP20701 1170 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 LMAN1P49257 510 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 CDKN1CP49918 316 aaPredicted RBP15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 OTUD4Q01804 1114 aaKnown RBP15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 RPA4Q13156 261 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 BOP1Q14137 746 aaKnown RBP15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 NCF4Q15080 339 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 PTCHD3Q3KNS1 767 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 GPR33Q49SQ1 333 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 SLC6A19Q695T7 634 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 CDHR3Q6ZTQ4 885 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 MED25Q71SY5 747 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 CCDC50Q8IVM0 306 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 SSC4DQ8WTU2 575 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 CLIP3Q96DZ5 547 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 DPH2Q9BQC3 489 aaPredicted RBP15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 ZDHHC3Q9NYG2 299 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 SERTAD3Q9UJW9 196 aa15.41■□□□□ 0.06
GTF2F1-203ENST00000594213 TNRC6AQ8NDV7 1962 aaKnown RBP15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 GSAPA4D1B5 854 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 TCP11X1B4DZS4 312 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 CFAP99D6REC4 459 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 H7C0S8 307 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 CCL22O00626 93 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 ZNF185O15231 689 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 PJA2O43164 708 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 ZNF749O43361 778 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 PVRP15151 417 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 CYP2A7P20853 494 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 PSMA3P25788 255 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 PTPN7P35236 360 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 HADHAP40939 763 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 GABRA4P48169 554 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 TMPRSS15P98073 1019 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 ATP1A4Q13733 1029 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 SARM1Q6SZW1 724 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 AMIGO1Q86WK6 493 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 TC2NQ8N9U0 490 aa15.4■□□□□ 0.06
GTF2F1-203ENST00000594213 CCDC110Q8TBZ0 833 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms