RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 GPC4O75487 556 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 S1PR4O95977 384 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 ESR1P03372 595 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 APOA4P06727 396 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 F7P08709 466 aaPredicted RBP14.18□□□□□ -0.14
VRK3-206ENST00000594090 ANKRD34CP0C6C1 535 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 FMO4P31512 558 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 CSTF2P33240 577 aaKnown RBP eCLIP14.18□□□□□ -0.14
VRK3-206ENST00000594090 ETV5P41161 510 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 ELK3P41970 407 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 SLC1A2P43004 574 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 PPP1CAP62136 330 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 HSPA14Q0VDF9 509 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 CTBP1Q13363 440 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 TMED2Q15363 201 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 SPANXN3Q5MJ09 141 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 HP1BP3Q5SSJ5 553 aaPredicted RBP14.18□□□□□ -0.14
VRK3-206ENST00000594090 DUPD1Q68J44 220 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 KLHL35Q6PF15 583 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 CLEC14AQ86T13 490 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 VRK3Q8IV63 474 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 LMNTD2Q8IXW0 634 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 SLC22A15Q8IZD6 547 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 UNC5BQ8IZJ1 945 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 PHC3Q8NDX5 983 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 ASZ1Q8WWH4 475 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 FGF11Q92914 225 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 CFAP36Q96G28 342 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 FAM167BQ9BTA0 163 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 HGH1Q9BTY7 390 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 PLAC1Q9HBJ0 212 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 WHRNQ9P202 907 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 CHMP2BQ9UQN3 213 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 ASF1AQ9Y294 204 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 TEX264Q9Y6I9 313 aa14.18□□□□□ -0.14
VRK3-206ENST00000594090 OR5K3A6NET4 321 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 E7ESA3 106 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 H3BMM5 538 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 NIPSNAP2O75323 286 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 SLCO2B1O94956 709 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 TUBB4AP04350 444 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 FGF3P11487 239 aaPredicted RBP14.17□□□□□ -0.14
VRK3-206ENST00000594090 CCL4P13236 92 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 PKMP14618 531 aaKnown RBP14.17□□□□□ -0.14
VRK3-206ENST00000594090 LEPRP48357 1165 aaKnown RBP14.17□□□□□ -0.14
VRK3-206ENST00000594090 CALCOCO2Q13137 446 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 HSP90AA5PQ58FG0 334 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 IRGCQ6NXR0 463 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 UNC5AQ6ZN44 842 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 OTOAQ7RTW8 1153 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 PRSS42Q7Z5A4 293 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 OOSP2Q86WS3 158 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 OR52E1Q8NGJ3 308 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 OR5AR1Q8NGP9 310 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 RAB17Q9H0T7 212 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 FBXO6Q9NRD1 293 aaPredicted RBP14.17□□□□□ -0.14
VRK3-206ENST00000594090 IARS2Q9NSE4 1012 aaKnown RBP14.17□□□□□ -0.14
VRK3-206ENST00000594090 ZC3H7BQ9UGR2 993 aaKnown RBP14.17□□□□□ -0.14
VRK3-206ENST00000594090 FBXO5Q9UKT4 447 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 UTP11Q9Y3A2 253 aaKnown RBP14.17□□□□□ -0.14
VRK3-206ENST00000594090 MRFAP1Q9Y605 127 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 ADAMTS20P59510 1910 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 CELSR3Q9NYQ7 3312 aa14.17□□□□□ -0.14
VRK3-206ENST00000594090 DMXL2Q8TDJ6 3036 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 MAP1BP46821 2468 aaKnown RBP14.16□□□□□ -0.14
VRK3-206ENST00000594090 KPNA5O15131 536 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 ERVK-10P10266 1014 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 MAPK10P53779 464 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 PCBP4P57723 403 aaKnown RBP14.16□□□□□ -0.14
VRK3-206ENST00000594090 MPP1Q00013 466 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 PDIA2Q13087 525 aaKnown RBP14.16□□□□□ -0.14
VRK3-206ENST00000594090 FASTKD3Q14CZ7 662 aaKnown RBP14.16□□□□□ -0.14
VRK3-206ENST00000594090 STEAP4Q687X5 459 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 FAM129CQ86XR2 697 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 TBC1D21Q8IYX1 336 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 OR5K2Q8NHB8 316 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 CERS2Q96G23 380 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 ZDHHC12Q96GR4 267 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 DCBLD2Q96PD2 775 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 TRIT1Q9H3H1 467 aaKnown RBP14.16□□□□□ -0.14
VRK3-206ENST00000594090 SRMSQ9H3Y6 488 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 ZNF768Q9H5H4 540 aaKnown RBP14.16□□□□□ -0.14
VRK3-206ENST00000594090 OCIAD1Q9NX40 245 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 GRHL1Q9NZI5 618 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 PCDHGA7Q9Y5G6 932 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 TPRP12270 2363 aaKnown RBP14.16□□□□□ -0.14
VRK3-206ENST00000594090 IGF2RP11717 2491 aa14.16□□□□□ -0.14
VRK3-206ENST00000594090 OR6C74A6NCV1 312 aa14.15□□□□□ -0.14
VRK3-206ENST00000594090 EFCAB7A8K855 629 aa14.15□□□□□ -0.14
VRK3-206ENST00000594090 E5RI56 91 aa14.15□□□□□ -0.14
VRK3-206ENST00000594090 TOX3O15405 576 aaPredicted RBP14.15□□□□□ -0.14
VRK3-206ENST00000594090 KIF1CO43896 1103 aaKnown RBP14.15□□□□□ -0.14
VRK3-206ENST00000594090 RASSF9O75901 435 aa14.15□□□□□ -0.14
VRK3-206ENST00000594090 SLC5A2P31639 672 aa14.15□□□□□ -0.14
VRK3-206ENST00000594090 EIF2S3P41091 472 aaKnown RBP14.15□□□□□ -0.14
VRK3-206ENST00000594090 CBLBQ13191 982 aa14.15□□□□□ -0.14
VRK3-206ENST00000594090 PRKG2Q13237 762 aa14.15□□□□□ -0.14
VRK3-206ENST00000594090 GBX1Q14549 363 aa14.15□□□□□ -0.14
VRK3-206ENST00000594090 PLEKHS1Q5SXH7 462 aa14.15□□□□□ -0.14
VRK3-206ENST00000594090 CACHD1Q5VU97 1274 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms