RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MANEAQ5SRI9 462 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 PAPD7Q5XG87 772 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 PCSK4Q6UW60 755 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 TIPARPQ7Z3E1 657 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 OOSP2Q86WS3 158 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 LCN9Q8WX39 176 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 UBXN4Q92575 508 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 PPM1MQ96MI6 270 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 OR6C1Q96RD1 312 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 UBL7Q96S82 380 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 CD180Q99467 661 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 CARD6Q9BX69 1037 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 P2RY12Q9H244 342 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 TFB2MQ9H5Q4 396 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 ANAPC5Q9UJX4 755 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 CDYLQ9Y232 598 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 TMEM184BQ9Y519 407 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 KALRNO60229 2985 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 GOLGA6L10A0A0M3HER8 536 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 TLCD2A6NGC4 264 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 PRMT5O14744 637 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 GPC4O75487 556 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 STK17BO94768 372 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 MLNP12872 115 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 ITGB6P18564 788 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 POLR2CP19387 275 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 MAGEA3P43357 314 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 GNG11P61952 73 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 PLOD1Q02809 727 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 IL11RAQ14626 422 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 DNTTIP2Q5QJE6 756 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 ARMC3Q5W041 872 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 VRK3Q8IV63 474 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 AGGF1Q8N302 714 aaeCLIP17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 NAT8LQ8N9F0 302 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 OR52E1Q8NGJ3 308 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 OR5AR1Q8NGP9 310 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 GRK7Q8WTQ7 553 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 SERPINB12Q96P63 405 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 TRIM56Q9BRZ2 755 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 SRMSQ9H3Y6 488 aa17.97■□□□□ 0.47
SHKBP1-202ENST00000593764 GOLGA8KD6RF30 607 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 GOLGA8TH3BQL2 631 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 GOLGA8MH3BSY2 632 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 BTN3A3O00478 584 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 RAD1O60671 282 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 DLGAP3O95886 979 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 TPBGLP0DKB5 382 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 FOLR1P15328 257 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 ZNF28P17035 718 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 KCNAB1Q14722 419 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 KIAA0930Q6ICG6 404 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 KMT5CQ86Y97 462 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 CREG2Q8IUH2 290 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 CACNA2D3Q8IZS8 1091 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 KRT222Q8N1A0 295 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 TTC9Q92623 222 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 HGH1Q9BTY7 390 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 DDX47Q9H0S4 455 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 XAB2Q9HCS7 855 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 POMT2Q9UKY4 750 aa17.96■□□□□ 0.47
SHKBP1-202ENST00000593764 ATRXP46100 2492 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 UBA6A0AVT1 1052 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 SDR42E2A6NKP2 422 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 F8W8V4 182 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 BTN3A1O00481 513 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 ATXN7O15265 892 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 FANCGO15287 622 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 FGF5P12034 268 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 AOAHP28039 575 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 ATP1A2P50993 1020 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 CSE1LP55060 971 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 RHDQ02161 417 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 TYSND1Q2T9J0 566 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 SYTL3Q4VX76 610 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 KIAA1614Q5VZ46 1190 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 ARMC6Q6NXE6 501 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 FBXO38Q6PIJ6 1188 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 AMIGO1Q86WK6 493 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 TBC1D21Q8IYX1 336 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 SLC22A15Q8IZD6 547 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 ADGRF3Q8IZF5 1079 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 NLGN4XQ8N0W4 816 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 CARFQ8N187 725 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 D2HGDHQ8N465 521 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 IL22RA1Q8N6P7 574 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 SIDT2Q8NBJ9 832 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 NLGN4YQ8NFZ3 816 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 SLCO2A1Q92959 643 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 RNF31Q96EP0 1072 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 BIRC8Q96P09 236 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 XKR8Q9H6D3 395 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 PCYOX1Q9UHG3 505 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 ICKQ9UPZ9 632 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 ASF1AQ9Y294 204 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 PCDHGA4Q9Y5G9 962 aa17.95■□□□□ 0.46
SHKBP1-202ENST00000593764 FAM237BA0A1B0GVD1 139 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 MAGEB16A2A368 324 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 ERVH48-1M5A8F1 160 aa17.94■□□□□ 0.46
SHKBP1-202ENST00000593764 NDUFS3O75489 264 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms