RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TLCD2A6NGC4 264 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 K7EM74 188 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 SUN1O94901 812 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 AGFG2O95081 481 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 POLBP06746 335 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 PRSS56P0CW18 603 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 NR1D1P20393 614 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 NDUFS1P28331 727 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 FDFT1P37268 417 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 MC1RQ01726 317 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 CDH17Q12864 832 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 DBN1Q16643 649 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
H3F3B-213ENST00000593254 FHL5Q5TD97 284 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 MEI1Q5TIA1 1274 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 TCTN3Q6NUS6 607 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 CYB5D1Q6P9G0 228 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 OOSP2Q86WS3 158 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 PPP1R3BQ86XI6 285 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 KMT5CQ86Y97 462 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 OR52K1Q8NGK4 314 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 STARD8Q92502 1023 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 MAP3K3Q99759 626 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 OR52A5Q9H2C5 316 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 COG4Q9H9E3 785 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 VPS37BQ9H9H4 285 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 ETNK1Q9HBU6 452 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 HRASLS2Q9NWW9 162 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 HEBP2Q9Y5Z4 205 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 KCNMB2Q9Y691 235 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 COLEC10Q9Y6Z7 277 aa12.85□□□□□ -0.35
H3F3B-213ENST00000593254 SPAG6O75602 509 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 KIAA0754O94854 1291 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 IFNB1P01574 187 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 GSTM1P09488 218 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 RNF224P0DH78 156 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 MSNP26038 577 aaKnown RBP12.84□□□□□ -0.35
H3F3B-213ENST00000593254 GSTM4Q03013 218 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 RPA4Q13156 261 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 TUBB3Q13509 450 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 RPS6KA1Q15418 735 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 DNTTIP2Q5QJE6 756 aaKnown RBP12.84□□□□□ -0.35
H3F3B-213ENST00000593254 ATP1A1-AS1Q5TC04 95 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 C6orf15Q6UXA7 325 aaPredicted RBP12.84□□□□□ -0.35
H3F3B-213ENST00000593254 ZNF662Q6ZS27 426 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 TAS2R42Q7RTR8 314 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 RASGRP3Q8IV61 690 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 CARFQ8N187 725 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 CLDN19Q8N6F1 224 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 TEX19Q8NA77 164 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 SIDT2Q8NBJ9 832 aaKnown RBP12.84□□□□□ -0.35
H3F3B-213ENST00000593254 GALNT11Q8NCW6 608 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 ACVR1CQ8NER5 493 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 OR13J1Q8NGT2 312 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 SSC4DQ8WTU2 575 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 C1orf54Q8WWF1 131 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 ZNF148Q9UQR1 794 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 RPS6KL1Q9Y6S9 549 aa12.84□□□□□ -0.35
H3F3B-213ENST00000593254 APCP25054 2843 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 UBA6A0AVT1 1052 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-213ENST00000593254 CCDC78A2IDD5 438 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 HEATR9A2RTY3 570 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 OR6C74A6NCV1 312 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 AP2A2O94973 939 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 FOLR1P15328 257 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 TCN2P20062 427 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 GNLYP22749 145 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 PDHA2P29803 388 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 FOXN2P32314 431 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 GRIA1P42261 906 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 NSG1P42857 185 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 CD151P48509 253 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 KPNA2P52292 529 aaKnown RBP12.83□□□□□ -0.36
H3F3B-213ENST00000593254 ACY1Q03154 408 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 SEMA5AQ13591 1074 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 ITIH4Q14624 930 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 KCNAB1Q14722 419 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 SIX1Q15475 284 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-213ENST00000593254 CCDC38Q502W7 563 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 PACS1Q6VY07 963 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 CERS6Q6ZMG9 384 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 BPHLQ86WA6 291 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-213ENST00000593254 D2HGDHQ8N465 521 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 DNAAF3Q8N9W5 541 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 GLIS1Q8NBF1 620 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 GALNT6Q8NCL4 622 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 RNF31Q96EP0 1072 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 STAMBPL1Q96FJ0 436 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 ELMO2Q96JJ3 720 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 FCRL4Q96PJ5 515 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 RANBP9Q96S59 729 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 PDE7BQ9NP56 450 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 CUEDC1Q9NWM3 386 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-213ENST00000593254 LNPEPQ9UIQ6 1025 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 RARRES3Q9UL19 164 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 RIMKLBQ9ULI2 386 aa12.83□□□□□ -0.36
H3F3B-213ENST00000593254 TNRC6AQ8NDV7 1962 aaKnown RBP12.82□□□□□ -0.36
H3F3B-213ENST00000593254 CCDC162PA2VCL2 907 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 OR51F1A6NGY5 319 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms