RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 TRIM15Q9C019 465 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 MCOLN1Q9GZU1 580 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 FBXO10Q9UK96 956 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 SLC8A2Q9UPR5 921 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 NUAK1O60285 661 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 WDR47O94967 919 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 ANXA5P08758 320 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 ENO2P09104 434 aaPredicted RBP19.29■□□□□ 0.68
CLIP3-206ENST00000593074 CYP2A6P11509 494 aaPredicted RBP19.29■□□□□ 0.68
CLIP3-206ENST00000593074 GRIA3P42263 894 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 HSPA13P48723 471 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 SMU1Q2TAY7 513 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 AP5B1Q2VPB7 878 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 CYP20A1Q6UW02 462 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 ADGRD2Q7Z7M1 963 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 HOMEZQ8IX15 550 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 MARVELD2Q8N4S9 558 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 C12orf76Q8N812 135 aaPredicted RBP19.29■□□□□ 0.68
CLIP3-206ENST00000593074 SORCS1Q8WY21 1168 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 EFHD1Q9BUP0 239 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 ARMC1Q9NVT9 282 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 ACTR3BQ9P1U1 418 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 CD84Q9UIB8 345 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 CNOT6Q9ULM6 557 aaKnown RBP19.29■□□□□ 0.68
CLIP3-206ENST00000593074 TTC34A8MYJ7 566 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 STK16O75716 305 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 G6PDP11413 515 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 ATP1B2P14415 290 aaPredicted RBP19.29■□□□□ 0.68
CLIP3-206ENST00000593074 EPB42P16452 691 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 JAK1P23458 1154 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 GGT5P36269 586 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 GRM2Q14416 872 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 PDK3Q15120 406 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 RFTN2Q52LD8 501 aaPredicted RBP19.29■□□□□ 0.68
CLIP3-206ENST00000593074 FAM109BQ6ICB4 259 aaPredicted RBP19.29■□□□□ 0.68
CLIP3-206ENST00000593074 KIAA2013Q8IYS2 634 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 DPP10Q8N608 796 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 LRTOMTQ8WZ04 291 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 MUC13Q9H3R2 512 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 Q9H521 79 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 NFKBIL1Q9UBC1 381 aaPredicted RBP19.29■□□□□ 0.68
CLIP3-206ENST00000593074 MBD1Q9UIS9 605 aaPredicted RBP19.29■□□□□ 0.68
CLIP3-206ENST00000593074 PDE10AQ9Y233 779 aa19.29■□□□□ 0.68
CLIP3-206ENST00000593074 ZNF839A8K0R7 811 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 LEFTY1O75610 366 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 C8GP07360 202 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 ZCCHC18P0CG32 403 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 RPIAP49247 311 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 DGKGP49619 791 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 ERVK-21P61565 698 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 TMC5Q6UXY8 1006 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 TRIM46Q7Z4K8 759 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 SPATA16Q9BXB7 569 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 SLC12A9Q9BXP2 914 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 POLR3HQ9Y535 204 aaPredicted RBP19.28■□□□□ 0.68
CLIP3-206ENST00000593074 PDE4DIPQ5VU43 2346 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 C15orf38-AP3S2A0A0A6YYH1 394 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 UPK3BL1B0FP48 263 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 UPK3BL2E5RIL1 263 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 H0YJX3 145 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 SLC28A1O00337 649 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 IFRD1O00458 451 aaPredicted RBP19.28■□□□□ 0.68
CLIP3-206ENST00000593074 TXNDC9O14530 226 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 RGS14O43566 566 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 CYP17A1P05093 508 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 CISD3P0C7P0 127 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 MPC1LP0DKB6 136 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 ADH5P11766 374 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 ZNF26P17031 533 aaPredicted RBP19.28■□□□□ 0.68
CLIP3-206ENST00000593074 VASPP50552 380 aaPredicted RBP19.28■□□□□ 0.68
CLIP3-206ENST00000593074 ARSIQ5FYB1 569 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 RABL3Q5HYI8 236 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 PLEKHS1Q5SXH7 462 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 HSD11B1LQ7Z5J1 315 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 ARPINQ7Z6K5 226 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 PTRH1Q86Y79 214 aaKnown RBP19.28■□□□□ 0.68
CLIP3-206ENST00000593074 KIAA1958Q8N8K9 716 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 OSCP1Q8WVF1 389 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 SLC29A3Q9BZD2 475 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 ALG2Q9H553 416 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 CCM2LQ9NUG4 571 aaPredicted RBP19.28■□□□□ 0.68
CLIP3-206ENST00000593074 ARL15Q9NXU5 204 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 RNF11Q9Y3C5 154 aa19.28■□□□□ 0.68
CLIP3-206ENST00000593074 ARNTLO00327 626 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 ARPC2O15144 300 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 ADH1CP00326 375 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 EPORP19235 508 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 AKT1P31749 480 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 GSK3BP49841 420 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 EEFSECP57772 596 aaKnown RBP19.27■□□□□ 0.68
CLIP3-206ENST00000593074 SP140Q13342 867 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 C9orf50Q5SZB4 431 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 UGT2A3Q6UWM9 527 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 PRR23BQ6ZRT6 265 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 UBE2R2Q712K3 238 aaPredicted RBP19.27■□□□□ 0.68
CLIP3-206ENST00000593074 DET1Q7L5Y6 550 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 TCAIMQ8N3R3 496 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 DNAJB14Q8TBM8 379 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 PIP4K2CQ8TBX8 421 aa19.27■□□□□ 0.68
CLIP3-206ENST00000593074 CANT1Q8WVQ1 401 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms