RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ETV5P41161 510 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 TSPAN7P41732 249 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 CAPZBP47756 277 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 LEPRP48357 1165 aaKnown RBP9.82□□□□□ -0.84
BRCA1-227ENST00000591849 GFERP55789 205 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 ARL4CP56559 192 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 CKAP4Q07065 602 aaKnown RBP9.82□□□□□ -0.84
BRCA1-227ENST00000591849 ABRQ12979 859 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 COL9A2Q14055 689 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-227ENST00000591849 SEMA3AQ14563 771 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 MORF4L2Q15014 288 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 DNTTIP2Q5QJE6 756 aaKnown RBP9.82□□□□□ -0.84
BRCA1-227ENST00000591849 DCAF12Q5T6F0 453 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 OTOAQ7RTW8 1153 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 MAATS1Q7Z4T9 603 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 PDZD3Q86UT5 571 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.82□□□□□ -0.84
BRCA1-227ENST00000591849 BBOF1Q8ND07 529 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 ACVR1CQ8NER5 493 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 CALML6Q8TD86 181 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 RSC1A1Q92681 617 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 SNF8Q96H20 258 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 C9orf72Q96LT7 481 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 FCRL3Q96P31 734 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-227ENST00000591849 TRIM51Q9BSJ1 452 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 HGH1Q9BTY7 390 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 ASPSCR1Q9BZE9 553 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 OR52A5Q9H2C5 316 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 KIR3DX1Q9H7L2 352 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 OCIAD1Q9NX40 245 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 OGFRQ9NZT2 677 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 PDP2Q9P2J9 529 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 POLG2Q9UHN1 485 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 CRYL1Q9Y2S2 319 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 SLC5A10A0PJK1 596 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 OR5K3A6NET4 321 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 FAM187AA6NFU0 413 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 CDRT15L2A8MXV6 281 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 POLR1CO15160 346 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 TOX3O15405 576 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 PRAMEF10O60809 474 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 URI1O94763 535 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 USP1O94782 785 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 TTC4O95801 387 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 RPN2P04844 631 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 FGF3P11487 239 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 PGAM1P18669 254 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 POLR2CP19387 275 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 RPS3P23396 243 aaKnown RBP eCLIP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 CCR7P32248 378 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 ARCN1P48444 511 aaKnown RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 ITGA8P53708 1063 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 RAB15P59190 212 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 DHX9Q08211 1270 aaKnown RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 C2orf54Q08AI8 447 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 CALCOCO2Q13137 446 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 ZNF470Q6ECI4 717 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 CYB5D1Q6P9G0 228 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 CEACAM20Q6UY09 585 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 ARHGAP22Q7Z5H3 698 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 CLEC14AQ86T13 490 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 TMEM135Q86UB9 458 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 LMNTD2Q8IXW0 634 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 TBC1D21Q8IYX1 336 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 SIDT2Q8NBJ9 832 aaKnown RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 SPATA4Q8NEY3 305 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 UBXN4Q92575 508 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 SIGLEC10Q96LC7 697 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 C16orf45Q96MC5 204 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 FOPNLQ96NB1 174 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 CTRCQ99895 268 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 FAM167BQ9BTA0 163 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 NAT9Q9BTE0 207 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 DPH1Q9BZG8 443 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 PPANQ9NQ55 473 aaKnown RBP9.81□□□□□ -0.84
BRCA1-227ENST00000591849 IL1RAPL1Q9NZN1 696 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 EPHA6Q9UF33 1036 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 SNX24Q9Y343 169 aa9.81□□□□□ -0.84
BRCA1-227ENST00000591849 A0A087WV48 116 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 EIF4E1BA6NMX2 242 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 MATN2O00339 956 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 KIF1CO43896 1103 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 C9P02748 559 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 ESR1P03372 595 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 PKMP14618 531 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 CDH3P22223 829 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 ARNTP27540 789 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 CD82P27701 267 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 ITPKBP27987 946 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 ATP1A2P50993 1020 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 UCNP55089 124 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 MRPS25P82663 173 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 MC2RQ01718 297 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 CTBP1Q13363 440 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 HIF1AQ16665 826 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 COL28A1Q2UY09 1125 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 HSP90AA5PQ58FG0 334 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 SPANXN3Q5MJ09 141 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 HP1BP3Q5SSJ5 553 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 TMTC4Q5T4D3 741 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms