RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
VMP1-211ENST00000591315 PGAM1P18669 254 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 ITPKBP27987 946 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 AOAHP28039 575 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 GABRB3P28472 473 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 RBMS1P29558 406 aaKnown RBP11.22□□□□□ -0.61
VMP1-211ENST00000591315 EIF2S3P41091 472 aaKnown RBP11.22□□□□□ -0.61
VMP1-211ENST00000591315 CAPZBP47756 277 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 SEPHS1P49903 392 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 PGGT1BP53609 377 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 SLC7A5Q01650 507 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 MN1Q10571 1320 aaPredicted RBP11.22□□□□□ -0.61
VMP1-211ENST00000591315 ABRQ12979 859 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 RPA4Q13156 261 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 THOC5Q13769 683 aaKnown RBP11.22□□□□□ -0.61
VMP1-211ENST00000591315 PLCL1Q15111 1095 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 TBC1D25Q3MII6 688 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 SYTL3Q4VX76 610 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 DNAJC21Q5F1R6 531 aaKnown RBP11.22□□□□□ -0.61
VMP1-211ENST00000591315 DUPD1Q68J44 220 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 IRGCQ6NXR0 463 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 CNSTQ6PJW8 725 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 C19orf48Q6RUI8 117 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 UNC5AQ6ZN44 842 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 ZNF572Q7Z3I7 529 aaPredicted RBP11.22□□□□□ -0.61
VMP1-211ENST00000591315 ARHGAP22Q7Z5H3 698 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 SDCCAG8Q86SQ7 713 aaPredicted RBP11.22□□□□□ -0.61
VMP1-211ENST00000591315 AVL9Q8NBF6 648 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
VMP1-211ENST00000591315 CFAP61Q8NHU2 1237 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 USP7Q93009 1102 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 GRAMD1AQ96CP6 724 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 CRELD1Q96HD1 420 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 C9orf72Q96LT7 481 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 TTC1Q99614 292 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 CARD6Q9BX69 1037 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 KIR3DX1Q9H7L2 352 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 VPS37BQ9H9H4 285 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 FOXJ2Q9P0K8 574 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 MED16Q9Y2X0 877 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 PCDHGA8Q9Y5G5 932 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 TEX264Q9Y6I9 313 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 FAM169AQ9Y6X4 670 aa11.22□□□□□ -0.61
VMP1-211ENST00000591315 ESYT3A0FGR9 886 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 KLHL33A6NCF5 533 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 EFCAB7A8K855 629 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 C9orf172C9J069 976 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 TMX2-CTNND1H3BSU7 103 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 BTN3A3O00478 584 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 ZW10O43264 779 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 PRAMEF10O60809 474 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 PIAS1O75925 651 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 KRT37O76014 449 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 HAUS5O94927 633 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 C9P02748 559 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 JMJD7P0C870 316 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 PAMP19021 973 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 POLR2CP19387 275 aaPredicted RBP11.21□□□□□ -0.61
VMP1-211ENST00000591315 OGNP20774 298 aaKnown RBP11.21□□□□□ -0.61
VMP1-211ENST00000591315 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.61
VMP1-211ENST00000591315 SLC5A2P31639 672 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 CD151P48509 253 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 SH3BP2P78314 561 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 PDIA2Q13087 525 aaKnown RBP11.21□□□□□ -0.61
VMP1-211ENST00000591315 SRSF6Q13247 344 aaKnown RBP11.21□□□□□ -0.61
VMP1-211ENST00000591315 KRT33BQ14525 404 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 HIF1AQ16665 826 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 CLPPQ16740 277 aaPredicted RBP11.21□□□□□ -0.61
VMP1-211ENST00000591315 KCNMB4Q86W47 210 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 FAM129CQ86XR2 697 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 RBM12BQ8IXT5 1001 aaKnown RBP11.21□□□□□ -0.61
VMP1-211ENST00000591315 SLC22A15Q8IZD6 547 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 BMPERQ8N8U9 685 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 NOA1Q8NC60 698 aaKnown RBP11.21□□□□□ -0.61
VMP1-211ENST00000591315 OR52E1Q8NGJ3 308 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 GIMAP7Q8NHV1 300 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 FGF11Q92914 225 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 TCF12Q99081 682 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 CTRCQ99895 268 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 LRRC1Q9BTT6 524 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 APMAPQ9HDC9 416 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 HRASLS2Q9NWW9 162 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 GNPTGQ9UJJ9 305 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 FBXO5Q9UKT4 447 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 ICKQ9UPZ9 632 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 ASF1AQ9Y294 204 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 TDRKHQ9Y2W6 561 aaKnown RBP11.21□□□□□ -0.61
VMP1-211ENST00000591315 NFS1Q9Y697 457 aa11.21□□□□□ -0.61
VMP1-211ENST00000591315 SEC16AO15027 2179 aa11.21□□□□□ -0.62
VMP1-211ENST00000591315 LOC400499M0QZD8 3231 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 ADAMTS20P59510 1910 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 IGHV5-51A0A0C4DH38 117 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 OR5K3A6NET4 321 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 QSOX1O00391 747 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 IFRD1O00458 451 aaPredicted RBP11.2□□□□□ -0.62
VMP1-211ENST00000591315 BTN3A1O00481 513 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 HGSO14964 777 aaPredicted RBP11.2□□□□□ -0.62
VMP1-211ENST00000591315 SLCO2B1O94956 709 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 GSTM1P09488 218 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms