RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 PDHA2P29803 388 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 CCR7P32248 378 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 PREPP48147 710 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 LEPRP48357 1165 aaKnown RBP21■□□□□ 0.95
R3HDM4-206ENST00000590454 CLCA4Q14CN2 919 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 EFTUD2Q15029 972 aaKnown RBP eCLIP21■□□□□ 0.953e-11■■■□□ 16.1
R3HDM4-206ENST00000590454 GUSBP11Q6P575 273 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 IYDQ6PHW0 289 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 C17orf82Q86X59 251 aaPredicted RBP21■□□□□ 0.95
R3HDM4-206ENST00000590454 RELL1Q8IUW5 271 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 SPDYE1Q8NFV5 336 aaPredicted RBP21■□□□□ 0.95
R3HDM4-206ENST00000590454 HM13Q8TCT9 377 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 SLC37A2Q8TED4 501 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 ATXN7L3BQ96GX2 97 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 CDC42EP4Q9H3Q1 356 aaKnown RBP21■□□□□ 0.95
R3HDM4-206ENST00000590454 COG4Q9H9E3 785 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 VPS37BQ9H9H4 285 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 GNPTGQ9UJJ9 305 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 MED16Q9Y2X0 877 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 ENTPD2Q9Y5L3 495 aa21■□□□□ 0.95
R3HDM4-206ENST00000590454 HEMK1Q9Y5R4 338 aaPredicted RBP21■□□□□ 0.95
R3HDM4-206ENST00000590454 A0A1W2PNU3 283 aaPredicted RBP20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 OR52A4PA6NMU1 304 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 PDZK1P1A8MUH7 402 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 FTH1P02794 183 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 F3P13726 295 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 PKMP14618 531 aaKnown RBP20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 IDSP22304 550 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 CSE1LP55060 971 aaKnown RBP20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 NAA30Q147X3 362 aaPredicted RBP20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 NR0B2Q15466 257 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 ERCC6LQ2NKX8 1250 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 C14orf28Q4W4Y0 310 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 LRRC6Q86X45 466 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 ARL14Q8N4G2 192 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 FBF1Q8TES7 1133 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 ELMO1Q92556 727 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 PRR11Q96HE9 360 aaPredicted RBP20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 NDNQ99608 321 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 FAM117AQ9C073 453 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 WWP1Q9H0M0 922 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 ZFATQ9P243 1243 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 IL17BQ9UHF5 180 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 RABGEF1Q9UJ41 708 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 PADI4Q9UM07 663 aa20.99■□□□□ 0.95
R3HDM4-206ENST00000590454 C17orf113A0A1B0GUU1 675 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 CPED1A4D0V7 1026 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 FAM159BA6NKW6 160 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 CDRT15L2A8MXV6 281 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 KCNJ13O60928 360 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 GSTA2P09210 222 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 ADARP55265 1226 aaKnown RBP20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 VSNL1P62760 191 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 BOP1Q14137 746 aaKnown RBP20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 PERM1Q5SV97 790 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 RBM20Q5T481 1227 aaKnown RBP20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 AGAP9Q5VTM2 703 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 ABRAXAS1Q6UWZ7 409 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 RBM44Q6ZP01 1051 aaKnown RBP20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 VRK3Q8IV63 474 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 SFRP1Q8N474 314 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 RMDN2Q96LZ7 410 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 SLC30A3Q99726 388 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 ZNF624Q9P2J8 865 aaPredicted RBP20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 CFAP20Q9Y6A4 193 aaKnown RBP20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 RNF215Q9Y6U7 377 aa20.98■□□□□ 0.95
R3HDM4-206ENST00000590454 SLC5A10A0PJK1 596 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 QSOX1O00391 747 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 PFDN6O15212 129 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 PPM1DO15297 605 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 ACSL3O95573 720 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 ESR1P03372 595 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 AOAHP28039 575 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 TNFRSF8P28908 595 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 MLLT3P42568 568 aaPredicted RBP20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 PGGT1BP53609 377 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 TIAL1Q01085 375 aaKnown RBP eCLIP20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 NFATC3Q12968 1075 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 KBTBD12Q3ZCT8 623 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 WASH2PQ6VEQ5 465 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 KIAA0408Q6ZU52 694 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 CYS1Q717R9 158 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 EFL1Q7Z2Z2 1120 aaKnown RBP20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 STRA8Q7Z7C7 330 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 ACVR1CQ8NER5 493 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 INSM2Q96T92 566 aaPredicted RBP20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 AARSD1Q9BTE6 412 aaKnown RBP20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 TXLNGYQ9BZA5 131 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 OR52A5Q9H2C5 316 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 SARS2Q9NP81 518 aaKnown RBP20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 WASH6PQ9NQA3 447 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 CDYLQ9Y232 598 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 VPS9D1Q9Y2B5 631 aa20.97■□□□□ 0.95
R3HDM4-206ENST00000590454 RP1P56715 2156 aa20.96■□□□□ 0.95
R3HDM4-206ENST00000590454 EME2A4GXA9 379 aaPredicted RBP20.96■□□□□ 0.95
R3HDM4-206ENST00000590454 TCEA3O75764 348 aa20.96■□□□□ 0.95
R3HDM4-206ENST00000590454 SLC19A1P41440 591 aa20.96■□□□□ 0.95
R3HDM4-206ENST00000590454 CLN3Q13286 438 aa20.96■□□□□ 0.95
R3HDM4-206ENST00000590454 DUS1LQ6P1R4 473 aaKnown RBP20.96■□□□□ 0.95
R3HDM4-206ENST00000590454 FOXR1Q6PIV2 292 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms