RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 RIT1Q92963 219 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 COQ8BQ96D53 544 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 SGIP1Q9BQI5 828 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 ACAD9Q9H845 621 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 SCML1Q9UN30 329 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 GMPPBQ9Y5P6 360 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 A0A0B4J293 547 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 ERI2A8K979 691 aaKnown RBP14.93□□□□□ -0.02
CIRBP-228ENST00000590347 VIPP01282 170 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 NTRK1P04629 796 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 GABARAPL2P60520 117 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 ACOX1Q15067 660 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 POU4F3Q15319 338 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 PRMT9Q6P2P2 845 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 KCTD20Q7Z5Y7 419 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 CPA6Q8N4T0 437 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 REPS2Q8NFH8 660 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.93□□□□□ -0.029e-7■□□□□ 9.4
CIRBP-228ENST00000590347 RNF31Q96EP0 1072 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 SLC47A1Q96FL8 570 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 CDCP1Q9H5V8 836 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 SCN3BQ9NY72 215 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 PKP3Q9Y446 797 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 SHROOM3Q8TF72 1996 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 A0A1W2PQ09 198 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 EEF2KO00418 725 aaKnown RBP14.92□□□□□ -0.02
CIRBP-228ENST00000590347 MDM4O15151 490 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 CYP11A1P05108 521 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 DCTP40126 519 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 SLC26A3P40879 764 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 NR2C2P49116 596 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 MFSD10Q14728 455 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 FLYWCH1Q4VC44 716 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 SYT6Q5T7P8 510 aaPredicted RBP14.92□□□□□ -0.02
CIRBP-228ENST00000590347 APOBEC3FQ8IUX4 373 aaKnown RBP14.92□□□□□ -0.02
CIRBP-228ENST00000590347 AMER2Q8N7J2 671 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 FAM162AQ96A26 154 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 SH3KBP1Q96B97 665 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 SLC39A13Q96H72 371 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 PSKH2Q96QS6 385 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 CASS4Q9NQ75 786 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 ZNF451Q9Y4E5 1061 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 SCAMP3O14828 347 aaKnown RBP14.92□□□□□ -0.02
CIRBP-228ENST00000590347 DFNA5O60443 496 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 OR2B3O76000 313 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 ANXA6P08133 673 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 ERCC2P18074 760 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 RUNDC3AQ59EK9 446 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 IKZF5Q9H5V7 419 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 TMEFF2Q9UIK5 374 aaPredicted RBP14.92□□□□□ -0.02
CIRBP-228ENST00000590347 C3orf18Q9UK00 162 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 H3BM21 787 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 M0R082 166 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 CAPN5O15484 640 aaPredicted RBP14.92□□□□□ -0.02
CIRBP-228ENST00000590347 ACSL4O60488 711 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 IMPDH1P20839 514 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 IGFBP5P24593 272 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 HOXD10P28358 340 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 SFNP31947 248 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 HCAR3P49019 387 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 DGKEP52429 567 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 MXD1Q05195 221 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 SEMA3AQ14563 771 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 PTPRCAPQ14761 206 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 TIGD6Q17RP2 521 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 ESCO2Q56NI9 601 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 NPWQ8N729 165 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 VANGL1Q8TAA9 524 aaPredicted RBP14.92□□□□□ -0.02
CIRBP-228ENST00000590347 TRAPPC12Q8WVT3 735 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 TSEN34Q9BSV6 310 aaKnown RBP14.92□□□□□ -0.02
CIRBP-228ENST00000590347 GLTPQ9NZD2 209 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 CLCA3PQ9Y6N3 262 aa14.92□□□□□ -0.02
CIRBP-228ENST00000590347 A0A1W2PP18 115 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 LBPP18428 481 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 CTSKP43235 329 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 SULT1E1P49888 294 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 SMSP52788 366 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 INCA1Q0VD86 236 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 LY6KQ17RY6 165 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 GTDC1Q4AE62 458 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 TMEM207Q6UWW9 146 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 CEP68Q76N32 757 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 PGBD5Q8N414 524 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 PAPD5Q8NDF8 572 aaKnown RBP14.91□□□□□ -0.02
CIRBP-228ENST00000590347 GPR151Q8TDV0 419 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 SEPT1Q8WYJ6 367 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 PTERQ96BW5 349 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 CDK15Q96Q40 435 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 GDF15Q99988 308 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 DPEP3Q9H4B8 488 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 C12orf10Q9HB07 376 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 ZC4H2Q9NQZ6 224 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 USE1Q9NZ43 259 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 TPRKBQ9Y3C4 175 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 ORC6Q9Y5N6 252 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 DOCK5Q9H7D0 1870 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 BBIP1A8MTZ0 92 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 AZIN1O14977 448 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 ARHGEF9O43307 516 aa14.91□□□□□ -0.02
CIRBP-228ENST00000590347 PDGFAP04085 211 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms