RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 CHST15Q7LFX5 561 aaPredicted RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 LSMEM2Q8N112 164 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 EGFL8Q99944 293 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 NPHS2Q9NP85 383 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 MOSPD1Q9UJG1 213 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 INVSQ9Y283 1065 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 A0A0C4DFX4 3053 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 PABPN1LA6NDY0 278 aaKnown RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 METTL12A8MUP2 240 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 RPS17P08708 135 aaKnown RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 HIST1H2AGP0C0S8 130 aaPredicted RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 HIST1H2ADP20671 130 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 AGTR2P50052 363 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 NAA20P61599 178 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 DMPKQ09013 629 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 SF3A3Q12874 501 aaKnown RBP eCLIP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 USP39Q53GS9 565 aaKnown RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 TPRG1LQ5T0D9 272 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 METRNLQ641Q3 311 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 SULT1C3Q6IMI6 304 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 ENPP7Q6UWV6 458 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 Q6ZSR6 202 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 CFAP61Q8NHU2 1237 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 PIWIL2Q8TC59 973 aaKnown RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 MCOLN3Q8TDD5 553 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 HIST1H2AHQ96KK5 128 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 HIST1H2AJQ99878 128 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 ORAI3Q9BRQ5 295 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 H2AFJQ9BTM1 129 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 ILKAPQ9H0C8 392 aaPredicted RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 OR52A5Q9H2C5 316 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 SPATA6Q9NWH7 488 aaPredicted RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 ARL15Q9NXU5 204 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 KLHL14Q9P2G3 628 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 PTBP2Q9UKA9 531 aaKnown RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 RAP2CQ9Y3L5 183 aa17.05■□□□□ 0.32
CXXC1-212ENST00000589940 TNPO3Q9Y5L0 923 aaKnown RBP17.05■□□□□ 0.32
CXXC1-212ENST00000589940 LRRC14BA6NHZ5 514 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 TNFRSF10CO14798 259 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 KCNJ13O60928 360 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 ACP5P13686 325 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 HOXA6P31267 233 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 GNPDA1P46926 289 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 AP1S2P56377 157 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 GALNT1Q10472 559 aaPredicted RBP17.04■□□□□ 0.32
CXXC1-212ENST00000589940 PRKAA1Q13131 559 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 FBXO48Q5FWF7 155 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 ANKS6Q68DC2 871 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 RPS27LQ71UM5 84 aaKnown RBP17.04■□□□□ 0.32
CXXC1-212ENST00000589940 RHBDF1Q96CC6 855 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 THOC1Q96FV9 657 aaKnown RBP17.04■□□□□ 0.32
CXXC1-212ENST00000589940 SEC16BQ96JE7 1060 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 CARS2Q9HA77 564 aaKnown RBP17.04■□□□□ 0.32
CXXC1-212ENST00000589940 EML4Q9HC35 981 aaKnown RBP17.04■□□□□ 0.32
CXXC1-212ENST00000589940 MARCOQ9UEW3 520 aaPredicted RBP17.04■□□□□ 0.32
CXXC1-212ENST00000589940 HAO1Q9UJM8 370 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 TECTAO75443 2155 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 ARHGEF33A8MVX0 844 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 CATP04040 527 aaKnown RBP17.04■□□□□ 0.32
CXXC1-212ENST00000589940 ANXA5P08758 320 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 RPL6Q02878 288 aaKnown RBP17.04■□□□□ 0.32
CXXC1-212ENST00000589940 SLC36A4Q6YBV0 504 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 ZNF781Q8N8C0 355 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 OR13H1Q8NG92 308 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 OR1E3Q8WZA6 343 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 PDXPQ96GD0 296 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 UHRF1Q96T88 793 aaPredicted RBP17.04■□□□□ 0.32
CXXC1-212ENST00000589940 KLC4Q9NSK0 619 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 GPSM3Q9Y4H4 160 aa17.04■□□□□ 0.32
CXXC1-212ENST00000589940 KITP10721 976 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 CD27P26842 260 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 MAP4P27816 1152 aaKnown RBP17.03■□□□□ 0.32
CXXC1-212ENST00000589940 ACADLP28330 430 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 PCBP2Q15366 365 aaKnown RBP eCLIP17.03■□□□□ 0.325e-10■■■■■ 38.8
CXXC1-212ENST00000589940 MBOAT1Q6ZNC8 495 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 PDZD3Q86UT5 571 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 CACNA2D3Q8IZS8 1091 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 CCDC197Q8NCU1 140 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 FAM174AQ8TBP5 190 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 OR2M4Q96R27 311 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 PNPOQ9NVS9 261 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 WWOXQ9NZC7 414 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 KLQ9UEF7 1012 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 PCTPQ9UKL6 214 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 ACSL5Q9ULC5 683 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.03■□□□□ 0.32
CXXC1-212ENST00000589940 ANKRD12Q6UB98 2062 aa17.03■□□□□ 0.32
CXXC1-212ENST00000589940 CCDC163A0A0D9SF12 145 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 MPSTP25325 297 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 DMWDQ09019 674 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 WDR75Q8IWA0 830 aaKnown RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 TCAIMQ8N3R3 496 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 ZNF483Q8TF39 744 aaPredicted RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 UBTD2Q8WUN7 234 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 ESAMQ96AP7 390 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 NSUN5Q96P11 429 aaKnown RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 EIF2B4Q9UI10 523 aaKnown RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 ASB1Q9Y576 335 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms