RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 TPH1P17752 444 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 POLR2CP19387 275 aaPredicted RBP13.97□□□□□ -0.17
MBD1-220ENST00000589758 CDH3P22223 829 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 STIP1P31948 543 aaKnown RBP13.97□□□□□ -0.17
MBD1-220ENST00000589758 KPNA2P52292 529 aaKnown RBP13.97□□□□□ -0.17
MBD1-220ENST00000589758 RPS15P62841 145 aaKnown RBP13.97□□□□□ -0.17
MBD1-220ENST00000589758 TLE1Q04724 770 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 LACTB2Q53H82 288 aaPredicted RBP13.97□□□□□ -0.17
MBD1-220ENST00000589758 CERS6Q6ZMG9 384 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 TAS2R42Q7RTR8 314 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 LINC00523Q86TU6 105 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 CT55Q8WUE5 264 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 NAT14Q8WUY8 206 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 LCN9Q8WX39 176 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 ATG4AQ8WYN0 398 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 ZNF501Q96CX3 271 aaPredicted RBP13.97□□□□□ -0.17
MBD1-220ENST00000589758 TMEM121Q9BTD3 319 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 TWSG1Q9GZX9 223 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 OR52A5Q9H2C5 316 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 SRMSQ9H3Y6 488 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 MVB12BQ9H7P6 319 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 SOHLH2Q9NX45 425 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 POMT2Q9UKY4 750 aa13.97□□□□□ -0.17
MBD1-220ENST00000589758 PIPSLA2A3N6 862 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 CDC14CA4D256 554 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 ERI2A8K979 691 aaKnown RBP13.96□□□□□ -0.17
MBD1-220ENST00000589758 KIF5CO60282 957 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 SCRG1O75711 98 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 GAS8O95995 478 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 PSMA3P25788 255 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 CASRP41180 1078 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 NSG1P42857 185 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 CDKN1CP49918 316 aaPredicted RBP13.96□□□□□ -0.17
MBD1-220ENST00000589758 GDF10P55107 478 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 SNX1Q13596 522 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 ITIH4Q14624 930 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 POU6F1Q14863 301 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 SKIDA1Q1XH10 827 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 TMEM126BQ8IUX1 230 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 C1orf54Q8WWF1 131 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 LRFN5Q96NI6 719 aa13.96□□□□□ -0.17
MBD1-220ENST00000589758 FRMD8P1Q9BZ68 369 aaPredicted RBP13.96□□□□□ -0.17
MBD1-220ENST00000589758 TFB2MQ9H5Q4 396 aaKnown RBP13.96□□□□□ -0.17
MBD1-220ENST00000589758 ZNF71Q9NQZ8 489 aaPredicted RBP13.96□□□□□ -0.17
MBD1-220ENST00000589758 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.96□□□□□ -0.17
MBD1-220ENST00000589758 GSAPA4D1B5 854 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 MROH6A6NGR9 719 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 SLC9B1P1A6NJY1 282 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 LIN7AO14910 233 aaPredicted RBP13.95□□□□□ -0.18
MBD1-220ENST00000589758 FGGP02679 453 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 KLK3P07288 261 aaPredicted RBP13.95□□□□□ -0.18
MBD1-220ENST00000589758 FURINP09958 794 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 PRDX3P30048 256 aaKnown RBP13.95□□□□□ -0.18
MBD1-220ENST00000589758 ARCN1P48444 511 aaKnown RBP13.95□□□□□ -0.18
MBD1-220ENST00000589758 LAMB3Q13751 1172 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 GPR19Q15760 415 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 UGT8Q16880 541 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 ZNF658BQ4V348 819 aaPredicted RBP13.95□□□□□ -0.18
MBD1-220ENST00000589758 TCTN3Q6NUS6 607 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 APLFQ8IW19 511 aaPredicted RBP13.95□□□□□ -0.18
MBD1-220ENST00000589758 THAP4Q8WY91 577 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 CPT1BQ92523 772 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 TFGQ92734 400 aaPredicted RBP13.95□□□□□ -0.18
MBD1-220ENST00000589758 ACTL8Q9H568 366 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 SMARCAL1Q9NZC9 954 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 MAN2B2Q9Y2E5 1009 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 JRKLQ9Y4A0 524 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 BSNQ9UPA5 3926 aa13.95□□□□□ -0.18
MBD1-220ENST00000589758 F8W8V4 182 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 RFPL1O75677 317 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 FTH1P02794 183 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 MSL3P1P0C860 447 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 PRSS56P0CW18 603 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 PTPN4P29074 926 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 PDHA2P29803 388 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 PMS2P54278 862 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 CDH17Q12864 832 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 KLRB1Q12918 225 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 BOP1Q14137 746 aaKnown RBP13.94□□□□□ -0.18
MBD1-220ENST00000589758 DBN1Q16643 649 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 LYPLAL1Q5VWZ2 237 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 IZUMO3Q5VZ72 239 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 FAM199XQ6PEV8 388 aaPredicted RBP13.94□□□□□ -0.18
MBD1-220ENST00000589758 ZNF517Q6ZMY9 492 aaPredicted RBP13.94□□□□□ -0.18
MBD1-220ENST00000589758 SYVN1Q86TM6 617 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 AMIGO1Q86WK6 493 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 PIANPQ8IYJ0 282 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 TAB3Q8N5C8 712 aaPredicted RBP13.94□□□□□ -0.18
MBD1-220ENST00000589758 CLDN19Q8N6F1 224 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 DNAAF3Q8N9W5 541 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 PHC3Q8NDX5 983 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 OR52E1Q8NGJ3 308 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 MR1Q95460 341 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.94□□□□□ -0.18
MBD1-220ENST00000589758 TTC1Q99614 292 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 EPN3Q9H201 632 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 SERTAD3Q9UJW9 196 aa13.94□□□□□ -0.18
MBD1-220ENST00000589758 FARSAQ9Y285 508 aaKnown RBP13.94□□□□□ -0.18
MBD1-220ENST00000589758 HEATR9A2RTY3 570 aa13.93□□□□□ -0.18
MBD1-220ENST00000589758 C2orf74A8MZ97 194 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms